Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAHK14_RS06960 Genome accession   NZ_CP155576
Coordinates   1355194..1356252 (-) Length   352 a.a.
NCBI ID   WP_065255840.1    Uniprot ID   A0A1B8Q4Y1
Organism   Moraxella sp. K1664     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1350194..1361252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHK14_RS06945 (AAHK14_06945) - 1350198..1352207 (-) 2010 WP_065255816.1 hypothetical protein -
  AAHK14_RS06950 (AAHK14_06950) hemA 1352882..1354216 (+) 1335 WP_065255814.1 glutamyl-tRNA reductase -
  AAHK14_RS06955 (AAHK14_06955) - 1354254..1355189 (-) 936 WP_227514684.1 regulatory protein RecX -
  AAHK14_RS06960 (AAHK14_06960) recA 1355194..1356252 (-) 1059 WP_065255840.1 recombinase RecA Machinery gene
  AAHK14_RS06965 (AAHK14_06965) - 1356492..1356614 (-) 123 WP_255518740.1 hypothetical protein -
  AAHK14_RS06970 (AAHK14_06970) yaaA 1356665..1357447 (-) 783 WP_065255813.1 peroxide stress protein YaaA -
  AAHK14_RS06975 (AAHK14_06975) - 1357590..1358660 (+) 1071 WP_065255812.1 enoyl-CoA hydratase/isomerase family protein -
  AAHK14_RS06980 (AAHK14_06980) - 1359210..1359497 (-) 288 WP_065255811.1 surface-adhesin E family protein -
  AAHK14_RS06985 (AAHK14_06985) - 1359649..1361178 (-) 1530 WP_083108199.1 reverse transcriptase domain-containing protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 37863.56 Da        Isoelectric Point: 4.7413

>NTDB_id=997918 AAHK14_RS06960 WP_065255840.1 1355194..1356252(-) (recA) [Moraxella sp. K1664]
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEIIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIE
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDN

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=997918 AAHK14_RS06960 WP_065255840.1 1355194..1356252(-) (recA) [Moraxella sp. K1664]
ATTGAAGGCAATAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCGTTCGGCAAAAACACCATTATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTAGAGACGATTTCCACAGGCTCGCTCGGGCTGGACATTGCTCTGGGGATTG
GCGGTTTACCAAAGGGGCGTATCATTGAGATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAGCAAGGCGGAAAATGTGCGTTCATTGACGCAGAACACGCCCTAGACCCCATTTATGCCAAAAAATT
GGGCGTAAATTTGAACGAACTTATGGTATCCCAACCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGATATGCTGGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCTGTTGCCGCCTTGACCCCAAAAGCCGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTAATGAGCCAAGCCTTGCGTAAAATCACAGGTAACGCCAAACGCTCTAACTG
TATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTCATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCTTGAAGTTCTATGCGTCTGTCCGCCTAGACATTCGCCGTATCGGTTCGGTCAAGGACAAAGAAGAAATCATCGGCTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATTATGTATGGCGAAGG
TATTAACCGCTTGGGCGAGATTGTAGATATCGGGGCAAGCCTTGACATTGTGGGCAAGTCAGGGGCGTGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCTGCAATCGCCCAAGAGATTGAA
GCCAAAATCCGTGAGCTAAAACTTGCCAATGTCGTGCCAGTCGCCCCCAGCGATGATGACGGCGAAGTGCCTGAATATGT
AGAAGGCATGGACAACTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B8Q4Y1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

75.358

99.148

0.747
  recA Acinetobacter baumannii D1279779

75.216

98.58

0.741
  recA Vibrio cholerae strain A1552

69.688

100

0.699
  recA Vibrio cholerae O1 biovar El Tor strain E7946

69.688

100

0.699
  recA Pseudomonas stutzeri DSM 10701

74.074

92.045

0.682
  recA Neisseria gonorrhoeae MS11

69.164

98.58

0.682
  recA Neisseria gonorrhoeae MS11

69.164

98.58

0.682
  recA Neisseria gonorrhoeae strain FA1090

69.164

98.58

0.682
  recA Glaesserella parasuis strain SC1401

68.481

99.148

0.679
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

65.889

97.443

0.642
  recA Ralstonia pseudosolanacearum GMI1000

71.29

88.068

0.628
  recA Helicobacter pylori 26695

66.873

91.761

0.614
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

65.749

92.898

0.611
  recA Helicobacter pylori strain NCTC11637

66.563

91.761

0.611
  recA Bacillus subtilis subsp. subtilis str. 168

65.528

91.477

0.599
  recA Streptococcus pneumoniae D39

61.111

92.045

0.562
  recA Streptococcus pneumoniae Rx1

61.111

92.045

0.562
  recA Streptococcus pneumoniae R6

61.111

92.045

0.562
  recA Streptococcus pneumoniae TIGR4

61.111

92.045

0.562
  recA Streptococcus mitis NCTC 12261

60.802

92.045

0.56
  recA Streptococcus pyogenes NZ131

60.802

92.045

0.56
  recA Streptococcus mitis SK321

60.494

92.045

0.557
  recA Streptococcus mutans UA159

60.185

92.045

0.554
  recA Lactococcus lactis subsp. cremoris KW2

58.896

92.614

0.545
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60

90.909

0.545
  recA Latilactobacillus sakei subsp. sakei 23K

59.375

90.909

0.54

Multiple sequence alignment