Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | AAFU62_RS08310 | Genome accession | NZ_CP154891 |
| Coordinates | 1713772..1714908 (-) | Length | 378 a.a. |
| NCBI ID | WP_023612576.1 | Uniprot ID | A0A5S4TE17 |
| Organism | Streptococcus pyogenes strain 318231 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1702947..1741345 | 1713772..1714908 | within | 0 |
Gene organization within MGE regions
Location: 1702947..1741345
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFU62_RS08245 (AAFU62_08245) | - | 1702947..1703285 (-) | 339 | Protein_1562 | helix-turn-helix domain-containing protein | - |
| AAFU62_RS08250 (AAFU62_08250) | - | 1703471..1704328 (+) | 858 | WP_111711508.1 | VOC family protein | - |
| AAFU62_RS08255 (AAFU62_08255) | yaaA | 1704370..1705101 (+) | 732 | WP_111718025.1 | peroxide stress protein YaaA | - |
| AAFU62_RS08260 (AAFU62_08260) | nrdG | 1705275..1705889 (-) | 615 | WP_021775544.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| AAFU62_RS08265 (AAFU62_08265) | - | 1705904..1706398 (-) | 495 | WP_014407930.1 | GNAT family N-acetyltransferase | - |
| AAFU62_RS08270 (AAFU62_08270) | - | 1706407..1707342 (-) | 936 | WP_136268349.1 | Gfo/Idh/MocA family oxidoreductase | - |
| AAFU62_RS08275 (AAFU62_08275) | - | 1707371..1707517 (-) | 147 | WP_002982210.1 | hypothetical protein | - |
| AAFU62_RS08280 (AAFU62_08280) | nrdD | 1707699..1709897 (-) | 2199 | WP_136130530.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| AAFU62_RS08285 (AAFU62_08285) | - | 1709994..1711553 (-) | 1560 | WP_111718027.1 | DUF2079 domain-containing protein | - |
| AAFU62_RS08290 (AAFU62_08290) | - | 1711967..1712272 (-) | 306 | WP_002982199.1 | DUF1292 domain-containing protein | - |
| AAFU62_RS08295 (AAFU62_08295) | ruvX | 1712284..1712703 (-) | 420 | WP_002982196.1 | Holliday junction resolvase RuvX | - |
| AAFU62_RS08300 (AAFU62_08300) | - | 1712700..1712969 (-) | 270 | WP_002982194.1 | IreB family regulatory phosphoprotein | - |
| AAFU62_RS08305 (AAFU62_08305) | spx | 1713082..1713480 (-) | 399 | WP_002982188.1 | transcriptional regulator Spx | - |
| AAFU62_RS08310 (AAFU62_08310) | recA | 1713772..1714908 (-) | 1137 | WP_023612576.1 | recombinase RecA | Machinery gene |
| AAFU62_RS08315 (AAFU62_08315) | - | 1714997..1716267 (-) | 1271 | Protein_1576 | competence/damage-inducible protein A | - |
| AAFU62_RS08320 (AAFU62_08320) | - | 1716336..1716896 (-) | 561 | WP_011018314.1 | DNA-3-methyladenine glycosylase I | - |
| AAFU62_RS08325 (AAFU62_08325) | ruvA | 1716906..1717502 (-) | 597 | WP_053308677.1 | Holliday junction branch migration protein RuvA | - |
| AAFU62_RS08330 (AAFU62_08330) | - | 1717504..1718724 (-) | 1221 | WP_136268352.1 | MFS transporter | - |
| AAFU62_RS08335 (AAFU62_08335) | mutL | 1718735..1720717 (-) | 1983 | WP_053308679.1 | DNA mismatch repair endonuclease MutL | - |
| AAFU62_RS08340 (AAFU62_08340) | mutS | 1720846..1723401 (-) | 2556 | WP_030126180.1 | DNA mismatch repair protein MutS | - |
| AAFU62_RS08345 (AAFU62_08345) | - | 1723388..1723719 (-) | 332 | Protein_1582 | YlbF family regulator | - |
| AAFU62_RS08350 (AAFU62_08350) | argR | 1723737..1724174 (-) | 438 | WP_002982171.1 | arginine repressor | - |
| AAFU62_RS08355 (AAFU62_08355) | argS | 1724465..1726156 (+) | 1692 | WP_129322346.1 | arginine--tRNA ligase | - |
| AAFU62_RS08360 (AAFU62_08360) | - | 1726244..1726552 (+) | 309 | WP_030126179.1 | bacteriocin immunity protein | - |
| AAFU62_RS08365 (AAFU62_08365) | - | 1726579..1727451 (-) | 873 | WP_002982164.1 | YitT family protein | - |
| AAFU62_RS08370 (AAFU62_08370) | - | 1727494..1728372 (-) | 879 | WP_023610708.1 | YitT family protein | - |
| AAFU62_RS08375 (AAFU62_08375) | - | 1728392..1729333 (-) | 942 | WP_129322348.1 | YitT family protein | - |
| AAFU62_RS08380 (AAFU62_08380) | aspS | 1729326..1731074 (-) | 1749 | WP_345864242.1 | aspartate--tRNA ligase | - |
| AAFU62_RS08385 (AAFU62_08385) | hisS | 1731412..1732692 (-) | 1281 | WP_136098202.1 | histidine--tRNA ligase | - |
| AAFU62_RS08390 (AAFU62_08390) | rpmF | 1732912..1733094 (+) | 183 | WP_000290414.1 | 50S ribosomal protein L32 | - |
| AAFU62_RS08395 (AAFU62_08395) | rpmG | 1733110..1733259 (+) | 150 | WP_002982147.1 | 50S ribosomal protein L33 | - |
| AAFU62_RS08400 (AAFU62_08400) | - | 1733299..1733523 (-) | 225 | Protein_1593 | FanG protein | - |
| AAFU62_RS08405 (AAFU62_08405) | - | 1733552..1734166 (+) | 615 | WP_009880708.1 | CadD family cadmium resistance transporter | - |
| AAFU62_RS08410 (AAFU62_08410) | cadX | 1734178..1734516 (+) | 339 | WP_000711091.1 | Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX | - |
| AAFU62_RS08415 (AAFU62_08415) | - | 1734560..1735975 (+) | 1416 | WP_168429784.1 | helix-turn-helix transcriptional regulator | - |
| AAFU62_RS08420 (AAFU62_08420) | - | 1736298..1736774 (+) | 477 | WP_023612561.1 | hypothetical protein | - |
| AAFU62_RS08425 (AAFU62_08425) | - | 1736919..1737239 (+) | 321 | WP_023612575.1 | hypothetical protein | - |
| AAFU62_RS08430 (AAFU62_08430) | - | 1737239..1738339 (+) | 1101 | WP_115354343.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AAFU62_RS08435 (AAFU62_08435) | - | 1738336..1738941 (+) | 606 | WP_136268354.1 | hypothetical protein | - |
| AAFU62_RS08440 (AAFU62_08440) | - | 1739145..1739750 (+) | 606 | WP_023612587.1 | replication protein | - |
| AAFU62_RS08445 (AAFU62_08445) | - | 1739743..1739991 (+) | 249 | WP_023612591.1 | MerR family transcriptional regulator | - |
| AAFU62_RS08450 (AAFU62_08450) | - | 1740095..1741345 (+) | 1251 | WP_115354345.1 | site-specific integrase | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 40632.21 Da Isoelectric Point: 4.8451
>NTDB_id=994666 AAFU62_RS08310 WP_023612576.1 1713772..1714908(-) (recA) [Streptococcus pyogenes strain 318231]
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
TTQIKGTGDQKDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDIIQKAGAWFSYNGEKIGQGSE
NAKRYLADHPELFDEIDRKVRVKFGLLEESEEESAMAVASEETDDLALDLDNGIEIED
Nucleotide
Download Length: 1137 bp
>NTDB_id=994666 AAFU62_RS08310 WP_023612576.1 1713772..1714908(-) (recA) [Streptococcus pyogenes strain 318231]
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGACGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCACCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
TTGGCAAAAAAATTAAAAAAGAATGAAGAAATCACTAAGAAGTTTGGTGACGAACGTCGCAAAGCCCTTGACGATGCTTT
GAAAAATATTGAAAAAGATTTTGGTAAGGGCGCAGTGATGCGATTAGGAGAACGTGCAGAGCAAAAAGTTCAGGTTATGA
GTTCAGGAAGTCTAGCTCTTGATATTGCGCTTGGAGCTGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGTCCA
GAGTCTTCCGGTAAAACGACTGTGGCTTTACATGCTGTAGCACAAGCTCAAAAAGAAGGTGGAATCGCAGCCTTTATCGA
TGCCGAGCATGCGCTTGATCCAGCTTATGCTGCTGCGCTTGGGGTTAATATTGATGAACTCCTCTTGTCTCAACCAGATT
CTGGAGAACAAGGACTTGAAATTGCAGGTAAATTGATTGATTCTGGTGCGGTTGATCTGGTTGTTGTCGATTCAGTAGCA
GCTTTAGTGCCACGTGCTGAAATTGATGGTGATATTGGCGATAGCCATGTCGGATTGCAAGCACGTATGATGAGTCAGGC
CATGCGTAAATTATCAGCTTCTATTAATAAAACAAAAACTATCGCTATCTTTATTAACCAATTGCGTGAAAAAGTTGGTG
TGATGTTTGGAAATCCTGAAACAACACCAGGTGGTCGAGCTTTGAAATTCTATGCTTCTGTTCGGCTGGATGTGCGTGGA
ACAACTCAAATTAAAGGAACTGGTGACCAAAAAGATAGCAGTATTGGTAAGGAGACCAAAATCAAGGTTGTTAAAAACAA
GGTCGCTCCGCCATTTAAGGTAGCAGAAGTTGAAATCATGTATGGGGAAGGTATTTCTCGTACAGGGGAGCTTGTGAAAA
TTGCTTCTGATTTGGACATTATCCAAAAAGCAGGTGCTTGGTTCTCTTATAATGGTGAGAAGATTGGCCAAGGTTCTGAA
AATGCTAAGCGTTATTTGGCCGATCACCCAGAATTGTTTGATGAAATCGACCGTAAAGTACGTGTTAAATTTGGTTTGCT
TGAAGAAAGCGAAGAAGAATCTGCTATGGCAGTAGCATCAGAAGAAACCGATGATCTTGCTTTAGATTTAGATAATGGTA
TTGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.