Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAHF05_RS17615 Genome accession   NZ_CP154353
Coordinates   3622155..3623213 (-) Length   352 a.a.
NCBI ID   WP_028016810.1    Uniprot ID   A0A2T4XVT5
Organism   Enterobacter adelaidei strain ECC3473     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3617155..3628213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHF05_RS17600 (AAHF05_17575) csrA 3618401..3618586 (-) 186 WP_000906486.1 carbon storage regulator CsrA -
  AAHF05_RS17605 (AAHF05_17580) alaS 3618828..3621455 (-) 2628 WP_028016808.1 alanine--tRNA ligase -
  AAHF05_RS17610 (AAHF05_17585) recX 3621587..3622087 (-) 501 WP_129324912.1 recombination regulator RecX -
  AAHF05_RS17615 (AAHF05_17590) recA 3622155..3623213 (-) 1059 WP_028016810.1 recombinase RecA Machinery gene
  AAHF05_RS17620 (AAHF05_17595) pncC 3623303..3623800 (-) 498 WP_049006085.1 nicotinamide-nucleotide amidase -
  AAHF05_RS17625 (AAHF05_17600) - 3623932..3624810 (-) 879 WP_028016812.1 metal ABC transporter substrate-binding protein -
  AAHF05_RS17630 (AAHF05_17605) - 3624825..3625685 (-) 861 WP_028016813.1 metal ABC transporter permease -
  AAHF05_RS17635 (AAHF05_17610) - 3625682..3626335 (-) 654 WP_028016814.1 metal ABC transporter ATP-binding protein -
  AAHF05_RS17640 (AAHF05_17615) mltB 3626595..3627695 (-) 1101 WP_176691090.1 lytic murein transglycosylase B -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 37855.24 Da        Isoelectric Point: 4.7456

>NTDB_id=993040 AAHF05_RS17615 WP_028016810.1 3622155..3623213(-) (recA) [Enterobacter adelaidei strain ECC3473]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLNNQDSTPDFAVDSVDAEETNEDF

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=993040 AAHF05_RS17615 WP_028016810.1 3622155..3623213(-) (recA) [Enterobacter adelaidei strain ECC3473]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCCACCGGTTCGCTTTCTCTGGATATCGCACTGGGCG
CTGGCGGTCTGCCGATGGGCCGTATCGTAGAAATCTACGGACCAGAGTCCTCAGGTAAAACGACGCTGACGCTGCAGGTT
ATCGCTGCGGCACAGCGTGAAGGTAAAACCTGTGCATTTATCGATGCCGAGCACGCGCTGGACCCTGTTTATGCTCGCAA
ACTGGGTGTTGATATCGACAACCTGCTCTGTTCTCAGCCGGACACCGGTGAACAGGCGCTGGAAATTTGTGACGCACTGG
CGCGTTCTGGTGCTGTTGACGTTATCGTGGTCGACTCCGTTGCCGCACTGACGCCAAAAGCCGAAATCGAAGGCGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCAATGCGTAAGCTGGCCGGTAACCTGAAACAGTCCAA
TACGCTGCTGATCTTCATTAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGTGGTA
ACGCGCTGAAATTCTACGCGTCTGTCCGTCTTGATATCCGCCGTATCGGTGCGGTAAAAGAGGGTGAGAACGTCGTCGGA
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATTGCCGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGTGA
AGGGATTAACTTCTTCGGTGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCCTGGTATAGCT
ATAACGGTGACAAAATTGGTCAGGGTAAAGCAAATGCGATCTCCTGGCTGAAAGAGAACCCGGCTGCGGCGAAAGAAATT
GAGAAGAAAGTGCGTGAGCTTCTGCTGAACAACCAGGACTCCACACCCGACTTCGCAGTTGATAGCGTGGATGCTGAAGA
AACTAACGAAGATTTTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(9-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4XVT5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Vibrio cholerae strain A1552

81.073

100

0.815
  recA Vibrio cholerae O1 biovar El Tor strain E7946

81.073

100

0.815
  recA Pseudomonas stutzeri DSM 10701

72.911

98.58

0.719
  recA Acinetobacter baumannii D1279779

74.924

92.898

0.696
  recA Acinetobacter baylyi ADP1

74.39

93.182

0.693
  recA Glaesserella parasuis strain SC1401

68.946

99.716

0.688
  recA Ralstonia pseudosolanacearum GMI1000

68.563

94.886

0.651
  recA Neisseria gonorrhoeae MS11

69.632

92.614

0.645
  recA Neisseria gonorrhoeae MS11

69.632

92.614

0.645
  recA Neisseria gonorrhoeae strain FA1090

69.632

92.614

0.645
  recA Helicobacter pylori strain NCTC11637

61.721

95.739

0.591
  recA Helicobacter pylori 26695

61.424

95.739

0.588
  recA Streptococcus pneumoniae Rx1

62.848

91.761

0.577
  recA Streptococcus pneumoniae R6

62.848

91.761

0.577
  recA Streptococcus pneumoniae D39

62.848

91.761

0.577
  recA Streptococcus pneumoniae TIGR4

62.848

91.761

0.577
  recA Bacillus subtilis subsp. subtilis str. 168

62.617

91.193

0.571
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.037

92.045

0.571
  recA Streptococcus mitis SK321

62.229

91.761

0.571
  recA Streptococcus mitis NCTC 12261

62.229

91.761

0.571
  recA Streptococcus pyogenes NZ131

61.846

92.33

0.571
  recA Lactococcus lactis subsp. cremoris KW2

61.92

91.761

0.568
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.06

94.602

0.568
  recA Streptococcus mutans UA159

61.538

92.33

0.568
  recA Latilactobacillus sakei subsp. sakei 23K

60.923

92.33

0.562
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.059

91.193

0.557

Multiple sequence alignment