Detailed information NTG0099254

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: QMG46_RS12090
• Genome accession: NZ_AP027042
• Coordinates: 2743218..2744264 (+)
• Length: 348 a.a.
• NCBI ID: WP_281852778.1
• Uniprot ID: -
• Organism: Dyella sp. GSA-30
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2738218..2749264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG46_RS12085 (DYGSA30_24010)	-	2742565..2743107 (+)	543	WP_281852777.1	CinA family protein	-
QMG46_RS12090 (DYGSA30_24020)	recA	2743218..2744264 (+)	1047	WP_281852778.1	recombinase RecA	Machinery gene
QMG46_RS12095 (DYGSA30_24030)	-	2744420..2744920 (+)	501	WP_281852779.1	regulatory protein RecX	-
QMG46_RS12100 (DYGSA30_24040)	alaS	2744977..2747622 (+)	2646	WP_281852780.1	alanine--tRNA ligase	-
QMG46_RS12105 (DYGSA30_24050)	csrA	2747879..2748085 (+)	207	WP_281852782.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37153.34 Da
• Isoelectric Point: 5.3408

>NTDB_id=99254 QMG46_RS12090 WP_281852778.1 2743218..2744264(+) (recA) [Dyella sp. GSA-30]
MDDNKRKALTSALSQIEKQFGKGAVMRLGDRADEAIETVSTGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLTLQAIA
NCQKNGGTAAFVDAEHALDPTYAEKLGVNVADLLISQPDTGEQALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGD
SHVGLHARLMSQALRKLTANIKKSNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKKGDEVIGSE
TRVKVVKNKVAPPFRQAEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYKGDRIGQGKENVRQFLRDNPAIANEIDA
ELRVRLLTNGKGASPAASAASEEALEEV

Nucleotide

• Length: 1047 bp

>NTDB_id=99254 QMG46_RS12090 WP_281852778.1 2743218..2744264(+) (recA) [Dyella sp. GSA-30]
ATGGATGACAACAAGCGCAAGGCGCTCACTTCCGCCCTCAGCCAGATCGAAAAGCAGTTCGGCAAGGGTGCCGTGATGCG
TCTGGGCGACCGCGCCGACGAGGCCATCGAAACCGTATCCACCGGTTCGCTGGGCCTGGACATTGCCTTGGGCATCGGCG
GCCTGCCGCGTGGCCGCGTGGTCGAAATCTACGGCCCTGAGTCCTCGGGCAAGACCACGCTGACCCTGCAGGCCATCGCC
AACTGCCAGAAGAACGGCGGCACGGCGGCCTTCGTCGACGCCGAGCATGCGCTCGACCCGACCTATGCCGAAAAGCTCGG
CGTCAATGTGGCCGATCTGCTGATCTCCCAGCCCGACACTGGTGAACAGGCGCTTGAAATCGCCGACATGCTGGTGCGTT
CGGGCGCCGTGGACATGGTCGTGGTCGACTCGGTCGCCGCGCTGACGCCCAAGGCCGAAATCGAAGGCGAGATGGGCGAC
TCCCACGTCGGCCTGCATGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGCCAATATCAAGAAGTCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTGCGCCTGGATATCCGCCGCATCGGCGCGGTGAAGAAGGGCGACGAGGTGATCGGTTCGGAA
ACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCGCCGCCGTTCCGCCAGGCCGAGTTCGAGATCCTCTACGGCGAGGGCAC
CTCGCGTGAGGGCGAGATCATCGAGCTGGGCGTCGCCCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAAGG
GCGACCGCATCGGCCAGGGCAAGGAAAACGTCCGCCAGTTCCTGCGCGACAACCCGGCCATCGCCAATGAGATCGACGCC
GAGCTGCGCGTGCGTCTGCTGACCAACGGCAAGGGTGCCTCGCCGGCGGCCTCCGCCGCCTCGGAAGAGGCGCTCGAAGA
GGTTTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	76.106	97.414	0.741
recA	Acinetobacter baylyi ADP1	74.344	98.563	0.733
recA	Ralstonia pseudosolanacearum GMI1000	70.787	100	0.724
recA	Acinetobacter baumannii D1279779	74.848	94.828	0.71
recA	Neisseria gonorrhoeae strain FA1090	75	93.103	0.698
recA	Neisseria gonorrhoeae MS11	75	93.103	0.698
recA	Neisseria gonorrhoeae MS11	75	93.103	0.698
recA	Glaesserella parasuis strain SC1401	69.501	97.989	0.681
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.341	94.253	0.672
recA	Vibrio cholerae strain A1552	71.341	94.253	0.672
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.559	95.115	0.624
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.025	91.667	0.624
recA	Helicobacter pylori strain NCTC11637	61.605	100	0.618
recA	Bacillus subtilis subsp. subtilis str. 168	66.875	91.954	0.615
recA	Helicobacter pylori 26695	61.318	100	0.615
recA	Streptococcus mutans UA159	62.997	93.966	0.592
recA	Streptococcus pyogenes NZ131	62.5	94.253	0.589
recA	Streptococcus mitis SK321	60.896	96.264	0.586
recA	Streptococcus pneumoniae R6	60.597	96.264	0.583
recA	Streptococcus pneumoniae TIGR4	60.597	96.264	0.583
recA	Streptococcus pneumoniae Rx1	60.597	96.264	0.583
recA	Streptococcus pneumoniae D39	60.597	96.264	0.583
recA	Streptococcus mitis NCTC 12261	61.963	93.678	0.58
recA	Latilactobacillus sakei subsp. sakei 23K	61.994	92.241	0.572
recA	Lactococcus lactis subsp. cremoris KW2	59.133	92.816	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.642	93.103	0.546