Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | R8507_RS09210 | Genome accession | NZ_AP026925 |
| Coordinates | 1778329..1779495 (-) | Length | 388 a.a. |
| NCBI ID | WP_044812435.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain PZ900700097 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1760905..1794640 | 1778329..1779495 | within | 0 |
Gene organization within MGE regions
Location: 1760905..1794640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8507_RS09120 (PC0094_17940) | - | 1761655..1762548 (+) | 894 | WP_001841509.1 | glycerophosphodiester phosphodiesterase family protein | - |
| R8507_RS09125 (PC0094_17950) | - | 1762506..1763567 (+) | 1062 | WP_000475762.1 | extracellular solute-binding protein | - |
| R8507_RS09130 (PC0094_17960) | - | 1763584..1764588 (+) | 1005 | WP_000627602.1 | ABC transporter ATP-binding protein | - |
| R8507_RS09135 (PC0094_17970) | - | 1764600..1766294 (+) | 1695 | WP_001232284.1 | iron ABC transporter permease | - |
| R8507_RS09140 (PC0094_17980) | - | 1766296..1766997 (+) | 702 | WP_317643177.1 | MgtC/SapB family protein | - |
| R8507_RS09145 (PC0094_17990) | - | 1767044..1767643 (+) | 600 | WP_001021235.1 | HAD family phosphatase | - |
| R8507_RS09150 (PC0094_18000) | - | 1767653..1769680 (+) | 2028 | WP_000256299.1 | ABC transporter substrate-binding protein | - |
| R8507_RS09155 (PC0094_18010) | - | 1769839..1770642 (+) | 804 | WP_078372244.1 | IS5 family transposase | - |
| R8507_RS09160 (PC0094_18020) | - | 1771380..1771640 (-) | 261 | WP_001209197.1 | hypothetical protein | - |
| R8507_RS09165 (PC0094_18030) | - | 1771699..1772250 (-) | 552 | WP_044812848.1 | hypothetical protein | - |
| R8507_RS09170 (PC0094_18040) | - | 1772240..1772437 (-) | 198 | WP_044812849.1 | hypothetical protein | - |
| R8507_RS09175 (PC0094_18050) | - | 1772441..1773235 (-) | 795 | WP_001101196.1 | hypothetical protein | - |
| R8507_RS09180 (PC0094_18060) | - | 1773643..1774068 (-) | 426 | WP_000204067.1 | hypothetical protein | - |
| R8507_RS09185 (PC0094_18070) | - | 1774197..1774556 (-) | 360 | WP_050082169.1 | ImmA/IrrE family metallo-endopeptidase | - |
| R8507_RS09190 (PC0094_18080) | - | 1774602..1774808 (-) | 207 | WP_000366093.1 | hypothetical protein | - |
| R8507_RS09195 (PC0094_18090) | - | 1774795..1774956 (-) | 162 | WP_001055999.1 | helix-turn-helix domain-containing protein | - |
| R8507_RS09200 (PC0094_18100) | lytA | 1775321..1776277 (-) | 957 | WP_000405234.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| R8507_RS09205 (PC0094_18110) | - | 1776653..1778023 (-) | 1371 | WP_317643187.1 | MATE family efflux transporter | - |
| R8507_RS09210 (PC0094_18120) | recA | 1778329..1779495 (-) | 1167 | WP_044812435.1 | recombinase RecA | Machinery gene |
| R8507_RS09215 (PC0094_18130) | cinA | 1779550..1780806 (-) | 1257 | WP_000642704.1 | competence/damage-inducible protein A | Machinery gene |
| R8507_RS09220 (PC0094_18140) | brpA | 1780891..1781907 (-) | 1017 | WP_000239278.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| R8507_RS09225 (PC0094_18150) | - | 1781915..1782433 (-) | 519 | WP_000455536.1 | GNAT family N-acetyltransferase | - |
| R8507_RS09230 (PC0094_18160) | tsaE | 1782423..1782866 (-) | 444 | WP_000288230.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| R8507_RS09235 (PC0094_18170) | comM | 1782952..1783572 (-) | 621 | WP_044812436.1 | hypothetical protein | Regulator |
| R8507_RS09240 (PC0094_18180) | - | 1783955..1784818 (-) | 864 | WP_044812437.1 | helix-turn-helix domain-containing protein | - |
| R8507_RS09245 (PC0094_18190) | - | 1785010..1785180 (+) | 171 | WP_001227862.1 | PhrA family quorum-sensing system peptide | - |
| R8507_RS09250 (PC0094_18200) | pneA1 | 1785283..1785507 (+) | 225 | WP_044812438.1 | two-peptide bacteriocin subunit PneA1 | - |
| R8507_RS09255 (PC0094_18210) | pneA2 | 1785514..1785702 (+) | 189 | WP_000786759.1 | two-peptide bacteriocin subunit PneA2 | - |
| R8507_RS09260 (PC0094_18220) | - | 1785818..1788808 (+) | 2991 | WP_000875571.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| R8507_RS09265 (PC0094_18230) | - | 1789158..1789862 (+) | 705 | WP_001033170.1 | flavodoxin family protein | - |
| R8507_RS09270 (PC0094_18240) | - | 1789843..1790772 (+) | 930 | WP_000912954.1 | M50 family metallopeptidase | - |
| R8507_RS09275 (PC0094_18250) | - | 1790769..1792877 (+) | 2109 | WP_000701298.1 | peptidase domain-containing ABC transporter | - |
| R8507_RS09280 (PC0094_18260) | - | 1792901..1794640 (+) | 1740 | WP_000699969.1 | S8 family serine peptidase | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 42013.87 Da Isoelectric Point: 4.8403
>NTDB_id=98368 R8507_RS09210 WP_044812435.1 1778329..1779495(-) (recA) [Streptococcus pneumoniae strain PZ900700097]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRFKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRFKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE
Nucleotide
Download Length: 1167 bp
>NTDB_id=98368 R8507_RS09210 WP_044812435.1 1778329..1779495(-) (recA) [Streptococcus pneumoniae strain PZ900700097]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATTAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTTTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATTAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTTTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.