Detailed information NTG0980997

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM2UG_RS22340
• Genome accession: NZ_CP182398
• Coordinates: 4548166..4549191 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4543166..4554191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM2UG_RS22320 (ACM2UG_22320)	metJ	4544227..4544544 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACM2UG_RS22325 (ACM2UG_22325)	yiiX	4544728..4545336 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACM2UG_RS22330 (ACM2UG_22330)	rpmE	4545397..4545609 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM2UG_RS22335 (ACM2UG_22335)	priA	4545812..4548010 (+)	2199	WP_001424430.1	primosomal protein N'	Machinery gene
ACM2UG_RS22340 (ACM2UG_22340)	cytR	4548166..4549191 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM2UG_RS22345 (ACM2UG_22345)	ftsN	4549283..4550242 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACM2UG_RS22350 (ACM2UG_22350)	hslV	4550335..4550865 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM2UG_RS22355 (ACM2UG_22355)	hslU	4550875..4552206 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACM2UG_RS22360 (ACM2UG_22360)	menA	4552273..4553199 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM2UG_RS22365 (ACM2UG_22365)	rraA	4553292..4553777 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM2UG_RS22370 (ACM2UG_22370)	zapB	4553862..4554107 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=980997 ACM2UG_RS22340 WP_000644904.1 4548166..4549191(+) (cytR) [Escherichia coli strain EC6]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=980997 ACM2UG_RS22340 WP_000644904.1 4548166..4549191(+) (cytR) [Escherichia coli strain EC6]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628