Detailed information NTG0980935

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AAFF32_RS10855
• Genome accession: NZ_CP151802
• Coordinates: 2351910..2352947 (+)
• Length: 345 a.a.
• NCBI ID: WP_216958566.1
• Uniprot ID: A0AAP2MI40
• Organism: Lysobacter sp. FW306-1B-D06B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2346910..2357947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFF32_RS10840 (AAFF32_10840)	-	2347846..2350383 (+)	2538	WP_342315188.1	TonB-dependent receptor	-
AAFF32_RS10845 (AAFF32_10845)	-	2350462..2350962 (+)	501	WP_216958571.1	CinA family protein	-
AAFF32_RS10850 (AAFF32_10850)	lexA	2351038..2351694 (+)	657	WP_342315189.1	transcriptional repressor LexA	-
AAFF32_RS10855 (AAFF32_10855)	recA	2351910..2352947 (+)	1038	WP_216958566.1	recombinase RecA	Machinery gene
AAFF32_RS10860 (AAFF32_10860)	recX	2352988..2353491 (+)	504	WP_216958563.1	recombination regulator RecX	-
AAFF32_RS10865 (AAFF32_10865)	alaS	2353701..2356334 (+)	2634	WP_342315190.1	alanine--tRNA ligase	-
AAFF32_RS10870 (AAFF32_10870)	csrA	2356473..2356679 (+)	207	WP_216958557.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37166.65 Da
• Isoelectric Point: 5.0663

>NTDB_id=980935 AAFF32_RS10855 WP_216958566.1 2351910..2352947(+) (recA) [Lysobacter sp. FW306-1B-D06B]
MDDNKKRALSAALGQIEKQFGKGSVMRMGDRTIEAAEVIGTGSLMLDIALGIGGLPKGRVVEVYGPESSGKTTLTLQAIA
QCQKAGGTCAFIDAEHALDPIYAGKLGVNVDDLLVSQPDTGEQALEIADMLVRSNAVDMVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNCLVIFINQLRMKIGVMMPGQSPETTTGGNALKFYASVRLDIRRIGSIKKGDEIIG
NQTRIKVVKNKMAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKSGAWYSAYDERIGQGKENARQYLKDNPQVAARL
EAALREKFVPAEASREEANDAAEDE

Nucleotide

• Length: 1038 bp

>NTDB_id=980935 AAFF32_RS10855 WP_216958566.1 2351910..2352947(+) (recA) [Lysobacter sp. FW306-1B-D06B]
ATGGACGACAACAAGAAGCGCGCCCTCTCGGCCGCACTGGGCCAGATCGAAAAGCAGTTCGGCAAGGGCTCGGTGATGCG
CATGGGCGACCGCACGATCGAGGCCGCCGAGGTCATCGGCACCGGCTCGCTGATGCTCGACATCGCGCTGGGCATCGGCG
GCCTGCCCAAGGGCCGCGTGGTCGAGGTCTACGGTCCGGAATCCTCGGGCAAGACCACCCTCACGCTGCAGGCCATCGCC
CAGTGCCAGAAGGCCGGCGGCACCTGCGCCTTCATCGACGCCGAGCACGCGCTCGATCCCATCTACGCCGGCAAGCTCGG
TGTCAACGTCGACGACCTGCTGGTCAGCCAGCCCGACACGGGCGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGCT
CGAACGCCGTCGACATGGTCGTGGTGGACTCCGTTGCGGCGCTGACGCCGAAGGCGGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCGGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAACATCAAGCGTTCCAACTGCCT
GGTGATCTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAACCACCACCGGCGGCA
ATGCGCTCAAGTTCTACGCCTCGGTGCGCCTGGACATCCGTCGCATCGGTTCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCCGCATCAAGGTCGTCAAGAACAAGATGGCGCCCCCGTTCAAGCAGGTGGTCACCGAGATCCTGTACGGCGA
GGGCATCTCGCGCGAGGGCGAGCTGATCGACATGGGCGTGGAGGCCAAGCTGGTCGAGAAGTCGGGCGCCTGGTACAGCG
CGTACGACGAGCGCATCGGCCAGGGCAAGGAGAACGCCCGCCAGTACCTCAAGGACAACCCGCAAGTGGCGGCCAGGCTC
GAAGCCGCGCTGCGCGAAAAGTTCGTGCCGGCCGAAGCCTCTCGCGAAGAGGCCAATGACGCGGCCGAGGACGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	72.384	99.71	0.722
recA	Acinetobacter baylyi ADP1	71.304	100	0.713
recA	Ralstonia pseudosolanacearum GMI1000	71.81	97.681	0.701
recA	Vibrio cholerae strain A1552	69.653	100	0.699
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.653	100	0.699
recA	Acinetobacter baumannii D1279779	72.036	95.362	0.687
recA	Neisseria gonorrhoeae MS11	69.325	94.493	0.655
recA	Neisseria gonorrhoeae MS11	69.325	94.493	0.655
recA	Neisseria gonorrhoeae strain FA1090	69.325	94.493	0.655
recA	Glaesserella parasuis strain SC1401	65.116	99.71	0.649
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.231	94.203	0.614
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.063	96.522	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	62.769	94.203	0.591
recA	Helicobacter pylori 26695	62.27	94.493	0.588
recA	Streptococcus mitis SK321	58.551	100	0.586
recA	Latilactobacillus sakei subsp. sakei 23K	60.479	96.812	0.586
recA	Helicobacter pylori strain NCTC11637	61.963	94.493	0.586
recA	Streptococcus pneumoniae D39	57.637	100	0.58
recA	Streptococcus pneumoniae TIGR4	57.637	100	0.58
recA	Streptococcus pneumoniae R6	57.637	100	0.58
recA	Streptococcus pneumoniae Rx1	57.637	100	0.58
recA	Streptococcus mutans UA159	57.471	100	0.58
recA	Streptococcus pyogenes NZ131	59.394	95.652	0.568
recA	Streptococcus mitis NCTC 12261	59.451	95.072	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.896	94.493	0.557
recA	Lactococcus lactis subsp. cremoris KW2	58.769	94.203	0.554