Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AAC899_RS06160 Genome accession   NZ_CP151168
Coordinates   1328187..1329239 (-) Length   350 a.a.
NCBI ID   WP_025094874.1    Uniprot ID   A0A0M1I2S1
Organism   Acinetobacter soli strain HY24     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1323187..1334239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS06125 (AAC899_06125) - 1323500..1324000 (+) 501 WP_004936804.1 OmpH family outer membrane protein -
  AAC899_RS06130 (AAC899_06130) lpxD 1324004..1325074 (+) 1071 WP_288399026.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  AAC899_RS06135 (AAC899_06135) fabZ 1325081..1325566 (+) 486 WP_025094871.1 3-hydroxyacyl-ACP dehydratase FabZ -
  AAC899_RS06140 (AAC899_06140) lpxA 1325563..1326351 (+) 789 WP_004936813.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  AAC899_RS06145 (AAC899_06145) - 1326394..1327242 (-) 849 WP_055414558.1 YbgF trimerization domain-containing protein -
  AAC899_RS06155 (AAC899_06155) - 1327657..1328136 (-) 480 WP_048763734.1 regulatory protein RecX -
  AAC899_RS06160 (AAC899_06160) recA 1328187..1329239 (-) 1053 WP_025094874.1 recombinase RecA Machinery gene
  AAC899_RS06165 (AAC899_06165) - 1329398..1329841 (-) 444 WP_004936824.1 S4 domain-containing protein -
  AAC899_RS06170 (AAC899_06170) - 1330401..1331261 (+) 861 WP_048763735.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  AAC899_RS06175 (AAC899_06175) - 1331318..1332055 (+) 738 WP_053469670.1 phosphoglycerate mutase family protein -
  AAC899_RS06180 (AAC899_06180) rpsT 1332123..1332392 (-) 270 WP_004925626.1 30S ribosomal protein S20 -
  AAC899_RS06185 (AAC899_06185) - 1332601..1333266 (+) 666 WP_048763739.1 NAD-dependent epimerase/dehydratase family protein -
  AAC899_RS06190 (AAC899_06190) rraA 1333279..1333794 (+) 516 WP_004936834.1 ribonuclease E activity regulator RraA -

Sequence

Protein


Download         Length: 350 a.a.        Molecular weight: 37968.30 Da        Isoelectric Point: 5.0274

>NTDB_id=975580 AAC899_RS06160 WP_025094874.1 1328187..1329239(-) (recA) [Acinetobacter soli strain HY24]
MDDNKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIENLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQGKNNVIRYFEENPSISAEIER
AIREQLLTKNTDPAAAHDDEPEEQPDFIES

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=975580 AAC899_RS06160 WP_025094874.1 1328187..1329239(-) (recA) [Acinetobacter soli strain HY24]
ATGGATGATAATAAAAGTAAGGCATTACAAGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTTATGCG
CTTAGGCGACAATACCGTGCAAGCCGTTGAAGCTGTTTCTACAGGTTCGCTCACGCTTGATATTGCGCTTGGCATTGGAG
GTTTACCGAAGGGTCGTATTGTTGAAATTTACGGTCCTGAATCCTCAGGTAAAACCACCATGACATTACAGGCAATCGCT
CAATGCCAAAAATCTGGCGGTACATGTGCATTTATCGATGCAGAACATGCACTAGATCCTCAATACGCACGCAAGCTCGG
TGTTGATATTGAAAATCTTTTGGTTTCTCAGCCAGACAATGGTGAACAAGCCCTAGAAATCGCGGATATGCTGGTTCGCT
CGGGTGCGATTGATCTAATCGTGGTCGATTCGGTTGCCGCATTGACCCCAAAAGCTGAAATTGAAGGTGAAATGGGCGAC
TCACATATGGGCTTGCAAGCCCGCTTGATGAGTCAAGCGCTACGTAAAATTACGGGTAATGCCAAACGCTCTAATTGCAT
GGTGATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGAAGCCCTGAAACCACAACGGGCGGTAATGCAC
TTAAATTTTATGCATCTGTTCGATTGGATATCCGTCGTATTGGCCAAGTAAAAGAAGGTGACGAAATCGTCGGTTCTGAA
ACCAAAGTAAAAGTGGTTAAGAACAAAATGGCCCCTCCTTTTCGCGAAGCTATTTTCCAGATCCTGTACGGTAAAGGTGT
TAACCAGTTAGGTGAACTTGTCGATCTCGCAGTTCAACAAAATATTGTTCAAAAAGCAGGTGCTTGGTATTCATATCAAG
GCAACAAAATTGGACAAGGTAAAAATAACGTGATTCGTTATTTTGAGGAAAATCCAAGTATTTCGGCAGAAATTGAACGC
GCTATTCGCGAACAATTGCTCACCAAAAATACAGATCCAGCCGCTGCGCATGATGATGAGCCAGAAGAACAGCCCGACTT
TATTGAAAGTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M1I2S1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

94.857

100

0.949
  recA Acinetobacter baumannii D1279779

93.103

99.429

0.926
  recA Pseudomonas stutzeri DSM 10701

74.925

95.714

0.717
  recA Vibrio cholerae strain A1552

73.089

93.429

0.683
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.089

93.429

0.683
  recA Ralstonia pseudosolanacearum GMI1000

69.851

95.714

0.669
  recA Glaesserella parasuis strain SC1401

71.605

92.571

0.663
  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646
  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646
  recA Neisseria gonorrhoeae strain FA1090

69.753

92.571

0.646
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.209

98.286

0.611
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.772

95.429

0.609
  recA Helicobacter pylori strain NCTC11637

63.609

93.429

0.594
  recA Helicobacter pylori 26695

63.303

93.429

0.591
  recA Streptococcus mitis SK321

59.531

97.429

0.58
  recA Streptococcus pneumoniae Rx1

58.166

99.714

0.58
  recA Streptococcus pneumoniae D39

58.166

99.714

0.58
  recA Streptococcus pneumoniae R6

58.166

99.714

0.58
  recA Streptococcus pneumoniae TIGR4

58.166

99.714

0.58
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.654

92.571

0.58
  recA Bacillus subtilis subsp. subtilis str. 168

62.422

92

0.574
  recA Streptococcus mutans UA159

61.162

93.429

0.571
  recA Streptococcus pyogenes NZ131

61.231

92.857

0.569
  recA Streptococcus mitis NCTC 12261

61.043

93.143

0.569
  recA Lactococcus lactis subsp. cremoris KW2

58.514

92.286

0.54
  recA Latilactobacillus sakei subsp. sakei 23K

58.255

91.714

0.534

Multiple sequence alignment