Detailed information NTG0973526

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: WOB24_RS12565
• Genome accession: NZ_CP150891
• Coordinates: 2657119..2658162 (-)
• Length: 347 a.a.
• NCBI ID: WP_339079610.1
• Uniprot ID: -
• Organism: Pseudomonas sp. TMP25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2652119..2663162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WOB24_RS12550 (WOB24_12550)	-	2653847..2655250 (+)	1404	WP_341303486.1	MBL fold metallo-hydrolase	-
WOB24_RS12555 (WOB24_12555)	-	2655383..2656462 (+)	1080	WP_341303487.1	LOG family protein	-
WOB24_RS12560 (WOB24_12560)	recX	2656643..2657107 (-)	465	WP_341303488.1	recombination regulator RecX	-
WOB24_RS12565 (WOB24_12565)	recA	2657119..2658162 (-)	1044	WP_339079610.1	recombinase RecA	Machinery gene
WOB24_RS12570 (WOB24_12570)	-	2658253..2658765 (-)	513	WP_341303489.1	CinA family protein	-
WOB24_RS12575 (WOB24_12575)	mutS	2658844..2661417 (+)	2574	WP_341303490.1	DNA mismatch repair protein MutS	-
WOB24_RS12580 (WOB24_12580)	fdxA	2661556..2661879 (+)	324	WP_274086771.1	ferredoxin FdxA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 36923.40 Da
• Isoelectric Point: 5.8713

>NTDB_id=973526 WOB24_RS12565 WP_339079610.1 2657119..2658162(-) (recA) [Pseudomonas sp. TMP25]
MDENKKRALAAALGQIEKQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLTLSVIA
EAQKLGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIVIDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVLHGFLEKSGAWYSYQGSKIGQGKANSAKYLEDNPEVARTVEG
LIREKLLVTAAPVKANAAAADLADADA

Nucleotide

• Length: 1044 bp

>NTDB_id=973526 WOB24_RS12565 WP_339079610.1 2657119..2658162(-) (recA) [Pseudomonas sp. TMP25]
ATGGACGAGAATAAGAAGCGCGCCTTGGCGGCAGCCTTGGGCCAGATTGAAAAACAATTTGGTAAAGGTGCAGTGATGCG
CATGGGCGATCAGGATCGCCAAGCGATTCCGGCCATCTCTACCGGCTCGCTGGGCCTGGACATTGCGCTGGGTATTGGCG
GACTGCCGCGAGGCCGTATCGTTGAAATCTACGGTCCTGAGTCCTCCGGTAAAACCACCCTGACCCTGTCGGTGATTGCT
GAAGCACAAAAGCTCGGCGCGACCTGCGCATTCGTCGACGCCGAGCACGCGCTTGACCCTGAATACGCCGGTAAGCTCGG
CGTGAATGTCGATGACCTGTTGGTTTCGCAGCCGGATACCGGCGAGCAGGCTCTAGAAATCACCGACATGCTGGTGCGTT
CCAACGCTGTCGACGTGATCGTTATCGACTCCGTTGCAGCCCTGGTACCGAAGGCTGAAATTGAAGGTGAAATGGGCGAC
ATGCACGTGGGCCTCCAAGCCCGCTTGATGTCGCAGGCGCTGCGTAAGATCACCGGCAATATCAAGAACGCGAACTGCTT
GGTGATTTTCATCAACCAGATCCGTATGAAAATCGGCGTAATGTTCGGCAGCCCAGAAACCACCACCGGCGGTAACGCGC
TGAAGTTCTACGCCTCGGTGCGTTTGGACATCCGCCGCACGGGTGCGGTGAAAGAAGGCGACGAAGTCGTCGGCAGCGAA
ACCCGCGTGAAAGTGGTGAAGAACAAAGTGGCACCACCTTTCCGTCAGGCTGAATTCCAGATTTTGTATGGCAAGGGTAT
TTACCGTAACGGCGAGATCATTGACCTCGGCGTGCTGCACGGTTTCTTAGAGAAGTCCGGTGCCTGGTACAGCTATCAGG
GCAGCAAGATCGGCCAAGGTAAGGCCAACTCGGCCAAATACTTGGAAGACAACCCGGAAGTGGCGCGCACCGTCGAGGGG
CTTATCCGCGAAAAATTGCTAGTAACGGCTGCGCCGGTCAAGGCTAATGCTGCGGCCGCTGACCTGGCCGATGCCGACGC
CTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	90.173	99.712	0.899
recA	Acinetobacter baylyi ADP1	75.227	95.389	0.718
recA	Acinetobacter baumannii D1279779	75.38	94.813	0.715
recA	Vibrio cholerae O1 biovar El Tor strain E7946	75.535	94.236	0.712
recA	Vibrio cholerae strain A1552	75.535	94.236	0.712
recA	Glaesserella parasuis strain SC1401	70.76	98.559	0.697
recA	Ralstonia pseudosolanacearum GMI1000	75.796	90.49	0.686
recA	Neisseria gonorrhoeae MS11	71.605	93.372	0.669
recA	Neisseria gonorrhoeae MS11	71.605	93.372	0.669
recA	Neisseria gonorrhoeae strain FA1090	71.605	93.372	0.669
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.914	94.236	0.602
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.84	95.389	0.599
recA	Helicobacter pylori strain NCTC11637	62.691	94.236	0.591
recA	Helicobacter pylori 26695	62.08	94.236	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	61.994	92.507	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	59.091	95.101	0.562
recA	Streptococcus mutans UA159	58.769	93.66	0.55
recA	Streptococcus mitis SK321	58.514	93.084	0.545
recA	Streptococcus pyogenes NZ131	57.622	94.524	0.545
recA	Streptococcus pneumoniae Rx1	57.669	93.948	0.542
recA	Streptococcus pneumoniae D39	57.669	93.948	0.542
recA	Streptococcus pneumoniae R6	57.669	93.948	0.542
recA	Streptococcus pneumoniae TIGR4	57.669	93.948	0.542
recA	Streptococcus mitis NCTC 12261	58.204	93.084	0.542
recA	Lactococcus lactis subsp. cremoris KW2	57.276	93.084	0.533
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.135	93.948	0.527