Detailed information NTG0970536

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: V1467_RS16510
• Genome accession: NZ_CP150481
• Coordinates: 3679802..3680836 (-)
• Length: 344 a.a.
• NCBI ID: WP_416306068.1
• Uniprot ID: -
• Organism: Neptunicella sp. SCSIO 80796
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3674802..3685836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1467_RS16500	-	3676305..3678731 (-)	2427	WP_416306066.1	efflux RND transporter permease subunit	-
V1467_RS16505	-	3678709..3679533 (-)	825	WP_416306067.1	VacJ family lipoprotein	-
V1467_RS16510	recA	3679802..3680836 (-)	1035	WP_416306068.1	recombinase RecA	Machinery gene
V1467_RS16515	-	3680994..3681491 (-)	498	WP_416306069.1	CinA family protein	-
V1467_RS16520	mutS	3681697..3684270 (+)	2574	WP_416308720.1	DNA mismatch repair protein MutS	-
V1467_RS16525	-	3684274..3684699 (+)	426	WP_416306070.1	FKBP-type peptidyl-prolyl cis-trans isomerase	-
V1467_RS16530	-	3684886..3685356 (+)	471	WP_416306071.1	Dps family protein	-
V1467_RS16535	-	3685428..3685778 (-)	351	WP_416306072.1	DMT family protein	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 36882.42 Da
• Isoelectric Point: 5.3224

>NTDB_id=970536 V1467_RS16510 WP_416306068.1 3679802..3680836(-) (recA) [Neptunicella sp. SCSIO 80796]
MDENKSRALSAALGQIEKQFGKGTIMRLGDSQALDIESISTGSLSIDIALGIGGLPCGRVVEIYGPESSGKTTLTLQVIA
EAQKKGKTCAFIDAEHALDPVYAGKLGVNVDDLLVSQPDTGEQALEICDMLVRSSAVDVVIVDSVAALTPKAEIEGDMGD
SHVGLQARLMSQALRKLTGNIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKEGDEVVGNE
TRVKVVKNKVAPPFKQAEFQIMYGAGICKEAELIDLGVEHKFVEKAGAWYSCNGERIGQGKANSVKYLQDNVAMAQDIEK
KLREKLLLSKTVAADEEPVSADVL

Nucleotide

• Length: 1035 bp

>NTDB_id=970536 V1467_RS16510 WP_416306068.1 3679802..3680836(-) (recA) [Neptunicella sp. SCSIO 80796]
ATGGACGAGAACAAATCAAGAGCCCTGTCTGCCGCGTTAGGGCAAATCGAAAAACAATTTGGTAAAGGCACTATAATGCG
TCTGGGAGACAGCCAGGCACTGGACATCGAATCTATCTCGACCGGCTCCTTGAGTATTGATATTGCCTTAGGTATTGGCG
GCTTACCTTGCGGCCGTGTGGTTGAAATATATGGTCCGGAGTCTTCTGGTAAAACAACACTGACATTACAAGTTATCGCC
GAAGCTCAGAAAAAAGGCAAAACTTGTGCTTTTATCGATGCCGAGCATGCGCTGGATCCTGTCTATGCGGGTAAGCTGGG
GGTAAATGTTGATGATTTATTAGTTTCTCAGCCCGATACCGGTGAACAGGCGCTGGAAATTTGTGACATGCTGGTGCGTT
CCAGCGCAGTTGATGTGGTGATTGTTGACTCGGTTGCCGCCTTAACACCCAAAGCAGAAATAGAAGGTGATATGGGGGAC
TCCCATGTTGGTCTGCAAGCCCGCCTGATGTCACAGGCGTTACGTAAGTTAACCGGTAATATTAAACGCTCGAATACTTT
GGTGATATTTATTAACCAGATCCGCATGAAAATTGGTGTTATGTTCGGCTCACCGGAAACCACTACTGGCGGTAATGCGC
TTAAATTCTATGCCTCTGTTCGTCTGGATATTCGTCGCATTGGAGCAGTAAAAGAAGGCGATGAAGTGGTAGGCAATGAA
ACCCGGGTCAAGGTTGTCAAAAATAAAGTCGCGCCGCCGTTTAAGCAGGCTGAATTCCAGATTATGTATGGTGCCGGTAT
TTGCAAAGAAGCCGAACTGATCGATTTGGGCGTCGAACATAAGTTTGTTGAAAAAGCCGGGGCCTGGTATAGCTGCAATG
GTGAACGGATCGGTCAAGGTAAGGCCAACTCAGTGAAATATTTGCAAGACAATGTGGCGATGGCTCAGGATATTGAAAAG
AAATTAAGGGAGAAATTATTGTTATCTAAAACCGTTGCCGCTGATGAAGAGCCGGTTTCGGCAGATGTGCTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.259	99.709	0.77
recA	Vibrio cholerae strain A1552	78.593	95.058	0.747
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.593	95.058	0.747
recA	Acinetobacter baumannii D1279779	72.595	99.709	0.724
recA	Acinetobacter baylyi ADP1	71.47	100	0.721
recA	Glaesserella parasuis strain SC1401	73.457	94.186	0.692
recA	Ralstonia pseudosolanacearum GMI1000	75.241	90.407	0.68
recA	Neisseria gonorrhoeae MS11	70.679	94.186	0.666
recA	Neisseria gonorrhoeae MS11	70.679	94.186	0.666
recA	Neisseria gonorrhoeae strain FA1090	70.679	94.186	0.666
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.018	98.256	0.619
recA	Bacillus subtilis subsp. subtilis str. 168	64.798	93.314	0.605
recA	Helicobacter pylori 26695	63.609	95.058	0.605
recA	Helicobacter pylori strain NCTC11637	63.609	95.058	0.605
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.934	96.221	0.596
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	93.314	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	60.494	94.186	0.57
recA	Streptococcus pneumoniae R6	59.756	95.349	0.57
recA	Streptococcus pneumoniae TIGR4	59.756	95.349	0.57
recA	Streptococcus pneumoniae D39	59.756	95.349	0.57
recA	Streptococcus pneumoniae Rx1	59.756	95.349	0.57
recA	Streptococcus mutans UA159	59.816	94.767	0.567
recA	Streptococcus mitis NCTC 12261	60.062	93.895	0.564
recA	Streptococcus mitis SK321	60.062	93.895	0.564
recA	Streptococcus pyogenes NZ131	58.537	95.349	0.558
recA	Lactococcus lactis subsp. cremoris KW2	56.966	93.895	0.535