Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   NST29_RS11370 Genome accession   NZ_CP150194
Coordinates   2276561..2277604 (-) Length   347 a.a.
NCBI ID   WP_033023151.1    Uniprot ID   A0A150MHN8
Organism   Geobacillus sp. FSL W8-0026     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2271561..2282604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST29_RS11350 (NST29_11350) - 2272229..2273152 (-) 924 WP_033023156.1 dipeptidase -
  NST29_RS11355 (NST29_11355) spoVS 2273244..2273504 (-) 261 WP_003251598.1 stage V sporulation protein SpoVS -
  NST29_RS11360 (NST29_11360) - 2273635..2274429 (-) 795 WP_033023154.1 TIGR00282 family metallophosphoesterase -
  NST29_RS11365 (NST29_11365) rny 2274528..2276084 (-) 1557 WP_033023152.1 ribonuclease Y -
  NST29_RS11370 (NST29_11370) recA 2276561..2277604 (-) 1044 WP_033023151.1 recombinase RecA Machinery gene
  NST29_RS11375 (NST29_11375) cinA 2277785..2279029 (-) 1245 WP_033023150.1 competence/damage-inducible protein A Machinery gene
  NST29_RS11380 (NST29_11380) pgsA 2279060..2279638 (-) 579 WP_033023148.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  NST29_RS11385 (NST29_11385) - 2279713..2280594 (-) 882 WP_033023146.1 helix-turn-helix domain-containing protein -
  NST29_RS11390 (NST29_11390) - 2280801..2281592 (-) 792 WP_033023144.1 DUF3388 domain-containing protein -
  NST29_RS11395 (NST29_11395) - 2281844..2282098 (-) 255 WP_033023142.1 DUF3243 domain-containing protein -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 37683.94 Da        Isoelectric Point: 5.3499

>NTDB_id=965783 NST29_RS11370 WP_033023151.1 2276561..2277604(-) (recA) [Geobacillus sp. FSL W8-0026]
MNQDRQAALEQALKQIERQFGKGAIMKLGEQVERKVSVVPSGSLALDIALGVGGYPRGRIVEIYGPESSGKTTVALHAIA
EVQKRGGQAAFIDAEHALDPIYAQKLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIEGEMGD
AHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYASVRLEVRRAEQIKQGNDMVGNK
TKIKVVKNKVAPPFKTADVDIMYGEGISREGEIIDMASELDIVQKSGSWYSYKDERLGQGRENAKQFLKENPHIADEIAR
AIRQHYGIDGSEAGGEPQQDEFALLEE

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=965783 NST29_RS11370 WP_033023151.1 2276561..2277604(-) (recA) [Geobacillus sp. FSL W8-0026]
GTGAATCAAGATCGTCAAGCCGCGTTGGAGCAGGCGTTAAAACAAATTGAACGACAGTTTGGCAAGGGGGCCATCATGAA
GCTCGGTGAGCAAGTGGAACGAAAAGTTTCCGTTGTGCCGAGCGGTTCGCTGGCGCTCGATATCGCGTTAGGCGTCGGCG
GCTATCCGCGCGGGCGGATTGTGGAAATTTACGGCCCGGAATCATCAGGGAAGACGACCGTTGCCCTTCACGCGATCGCT
GAGGTGCAAAAGCGGGGCGGGCAAGCAGCTTTCATCGATGCCGAGCACGCGCTCGATCCAATCTATGCGCAAAAATTAGG
AGTCAATATCGATGAACTGTTGCTTTCCCAGCCCGACACCGGCGAACAGGCGCTCGAAATCGCCGAAGCGCTCGTACGAA
GCGGCGCGGTCGATATTATCGTCATCGACTCGGTGGCGGCGCTCGTGCCGAAAGCGGAAATTGAAGGAGAGATGGGCGAT
GCCCACGTCGGCTTGCAAGCCCGCCTCATGTCGCAGGCGCTCCGCAAGCTGTCTGGCGCCATCAACAAATCGAAAACGAT
CGCCATTTTCATCAACCAAATCCGCGAGAAAGTCGGCGTCATGTTTGGCAATCCAGAAACAACGCCGGGGGGGCGGGCGC
TGAAGTTTTACGCTTCCGTCCGCCTAGAAGTGCGCCGCGCCGAACAAATCAAGCAAGGCAACGACATGGTCGGCAACAAG
ACGAAAATCAAAGTCGTCAAAAACAAAGTCGCGCCGCCGTTTAAAACAGCTGATGTCGACATCATGTACGGCGAAGGCAT
TTCCCGCGAAGGGGAAATCATCGATATGGCGTCCGAACTCGACATCGTGCAAAAGAGCGGTTCGTGGTATTCGTACAAAG
ACGAACGGCTTGGCCAAGGCCGGGAAAACGCAAAGCAATTTTTGAAAGAAAATCCGCATATTGCCGATGAAATCGCCCGT
GCCATCCGTCAACATTACGGCATTGACGGCAGCGAGGCGGGCGGTGAACCGCAGCAAGACGAGTTCGCGTTGCTTGAGGA
ATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(8-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A150MHN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

85.671

94.524

0.81
  recA Latilactobacillus sakei subsp. sakei 23K

77.231

93.66

0.723
  recA Streptococcus pneumoniae R6

70.52

99.712

0.703
  recA Streptococcus pneumoniae Rx1

70.52

99.712

0.703
  recA Streptococcus pneumoniae D39

70.52

99.712

0.703
  recA Streptococcus pneumoniae TIGR4

70.52

99.712

0.703
  recA Streptococcus mitis SK321

70.435

99.424

0.7
  recA Streptococcus mitis NCTC 12261

70.058

99.135

0.695
  recA Streptococcus mutans UA159

71.125

94.813

0.674
  recA Streptococcus pyogenes NZ131

71.037

94.524

0.671
  recA Lactococcus lactis subsp. cremoris KW2

69.162

96.254

0.666
  recA Ralstonia pseudosolanacearum GMI1000

69.01

90.202

0.622
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.158

98.559

0.622
  recA Neisseria gonorrhoeae MS11

64.848

95.101

0.617
  recA Neisseria gonorrhoeae MS11

64.848

95.101

0.617
  recA Neisseria gonorrhoeae strain FA1090

64.848

95.101

0.617
  recA Acinetobacter baylyi ADP1

60.92

100

0.611
  recA Acinetobacter baumannii D1279779

61.584

98.271

0.605
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.83

94.813

0.605
  recA Vibrio cholerae strain A1552

64.815

93.372

0.605
  recA Vibrio cholerae O1 biovar El Tor strain E7946

64.815

93.372

0.605
  recA Pseudomonas stutzeri DSM 10701

60.641

98.847

0.599
  recA Glaesserella parasuis strain SC1401

63.665

92.795

0.591
  recA Helicobacter pylori 26695

62.5

94.524

0.591
  recA Helicobacter pylori strain NCTC11637

62.5

94.524

0.591
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.091

91.354

0.576

Multiple sequence alignment