Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   NSS75_RS13755 Genome accession   NZ_CP150175
Coordinates   2658077..2659150 (-) Length   357 a.a.
NCBI ID   WP_339233393.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2653077..2664150
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS13730 (NSS75_13730) - 2653221..2653571 (+) 351 Protein_2657 sigma-70 family RNA polymerase sigma factor -
  NSS75_RS13735 (NSS75_13735) spoIVCA 2653599..2655059 (-) 1461 WP_339237641.1 site-specific DNA recombinase SpoIVCA -
  NSS75_RS13740 (NSS75_13740) - 2655017..2655195 (-) 179 Protein_2659 hypothetical protein -
  NSS75_RS13745 (NSS75_13745) - 2655852..2657369 (+) 1518 WP_339233391.1 class I adenylate-forming enzyme family protein -
  NSS75_RS13750 (NSS75_13750) - 2657414..2657743 (-) 330 Protein_2661 excinuclease ABC subunit UvrA -
  NSS75_RS13755 (NSS75_13755) recA 2658077..2659150 (-) 1074 WP_339233393.1 recombinase RecA Machinery gene
  NSS75_RS13760 (NSS75_13760) - 2659689..2660018 (-) 330 WP_339233395.1 hypothetical protein -
  NSS75_RS13765 (NSS75_13765) uvrA 2660002..2662878 (-) 2877 WP_339233397.1 excinuclease ABC subunit UvrA -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39096.33 Da        Isoelectric Point: 4.8560

>NTDB_id=964936 NSS75_RS13755 WP_339233393.1 2658077..2659150(-) (recA) [Bacillus sp. FSL K6-1012]
MNNRQAALDMALKQIEKQFGKGSVIKMGEGTYTKVESSSSGSLALDIALGINGYPKGRIMEVYGPESSGKTTVSLHAIAE
VQKSGGRAAFIDAEHALDPVYARKIGVDIDELLLSQPDTGEQALEIAEALVRSGAVDIIVVDSVAALVPQKEIEGEMGDS
HIGLQARLMSQALRKLSGAINKSKTITIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRGEQLKLGNDIVGNKT
RIKVVKNKMAPPFRTAEVDIMYGEGISKEGEIIDIGSELDIVQKFGSWFAYNEERLGQGRENAKIFLKENPEIREEIRKT
IIDFKYSNGIQTNTDIDTDTDIDIDTDNSIDNDSEKQ

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=964936 NSS75_RS13755 WP_339233393.1 2658077..2659150(-) (recA) [Bacillus sp. FSL K6-1012]
ATGAATAATAGACAAGCAGCACTAGATATGGCTCTAAAACAAATTGAAAAACAATTCGGTAAAGGATCAGTTATTAAGAT
GGGAGAAGGCACATATACAAAAGTTGAGTCATCTAGCTCAGGCTCATTAGCTTTAGATATAGCTCTTGGAATTAATGGTT
ATCCCAAAGGAAGAATTATGGAAGTTTACGGACCCGAAAGTTCAGGTAAAACAACAGTTTCCTTACACGCAATTGCAGAA
GTACAAAAAAGTGGAGGTCGAGCTGCCTTTATTGATGCTGAACACGCACTTGATCCAGTTTACGCAAGAAAAATAGGTGT
AGATATTGATGAGTTACTGTTATCGCAACCGGATACTGGTGAACAGGCACTTGAAATTGCCGAAGCATTAGTTAGAAGTG
GTGCTGTTGATATTATTGTTGTTGATTCAGTAGCAGCATTAGTTCCACAAAAAGAAATTGAAGGGGAAATGGGAGACTCT
CACATAGGTCTACAAGCTCGTTTGATGTCTCAAGCTCTTCGTAAACTATCTGGAGCAATCAATAAGTCAAAAACCATTAC
CATCTTCATCAATCAAATCAGGGAGAAGGTAGGCGTTATGTTTGGAAATCCGGAAACAACGCCAGGTGGAAGAGCATTAA
AATTCTATTCTTCCGTTCGTCTTGAGGTTCGCCGGGGTGAACAACTTAAACTAGGAAATGACATAGTTGGTAATAAAACA
AGAATTAAAGTAGTCAAAAATAAGATGGCACCTCCTTTTCGCACTGCTGAAGTAGACATTATGTATGGAGAAGGTATATC
AAAAGAAGGGGAAATCATAGATATTGGTTCTGAATTAGATATTGTTCAAAAGTTTGGATCTTGGTTTGCATATAATGAGG
AGCGTTTAGGACAGGGACGAGAAAACGCTAAGATTTTCTTAAAAGAAAATCCTGAAATTAGAGAAGAAATTAGAAAAACC
ATTATTGATTTCAAATATAGTAATGGTATTCAGACCAATACTGATATTGATACTGATACTGATATTGATATTGATACTGA
TAACAGTATTGATAACGATAGCGAAAAGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

83.591

90.476

0.756

  recA Latilactobacillus sakei subsp. sakei 23K

67.236

98.319

0.661

  recA Streptococcus pyogenes NZ131

63.611

100

0.641

  recA Streptococcus pneumoniae D39

68.323

90.196

0.616

  recA Streptococcus pneumoniae R6

68.323

90.196

0.616

  recA Streptococcus pneumoniae TIGR4

68.323

90.196

0.616

  recA Streptococcus pneumoniae Rx1

68.323

90.196

0.616

  recA Streptococcus mitis NCTC 12261

68.868

89.076

0.613

  recA Streptococcus mutans UA159

68.125

89.636

0.611

  recA Streptococcus mitis SK321

68.553

89.076

0.611

  recA Lactococcus lactis subsp. cremoris KW2

66.038

89.076

0.588

  recA Acinetobacter baumannii D1279779

61.111

95.798

0.585

  recA Neisseria gonorrhoeae strain FA1090

62.5

91.877

0.574

  recA Neisseria gonorrhoeae MS11

62.5

91.877

0.574

  recA Neisseria gonorrhoeae MS11

62.5

91.877

0.574

  recA Acinetobacter baylyi ADP1

64.062

89.636

0.574

  recA Glaesserella parasuis strain SC1401

59.302

96.359

0.571

  recA Vibrio cholerae O1 biovar El Tor strain E7946

63.636

89.356

0.569

  recA Vibrio cholerae strain A1552

63.636

89.356

0.569

  recA Pseudomonas stutzeri DSM 10701

63.323

89.356

0.566

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.928

89.916

0.566

  recA Ralstonia pseudosolanacearum GMI1000

64.495

85.994

0.555

  recA Helicobacter pylori 26695

62.658

88.515

0.555

  recA Helicobacter pylori strain NCTC11637

62.342

88.515

0.552

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.429

91.317

0.552

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

58.438

89.636

0.524


Multiple sequence alignment