Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | NMC34_RS17125 | Genome accession | NZ_AP025836 |
| Coordinates | 3571690..3572748 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain FUJ80199 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3514044..3582424 | 3571690..3572748 | within | 0 |
Gene organization within MGE regions
Location: 3514044..3582424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMC34_RS16870 (FJMB80199_33070) | - | 3514044..3514961 (+) | 918 | WP_022649106.1 | LysR family transcriptional regulator | - |
| NMC34_RS16875 (FJMB80199_33080) | - | 3515856..3526655 (+) | 10800 | WP_022649107.1 | BapA/Bap/LapF family large adhesin | - |
| NMC34_RS16880 (FJMB80199_33090) | - | 3526738..3528141 (+) | 1404 | WP_022649108.1 | TolC family outer membrane protein | - |
| NMC34_RS16885 (FJMB80199_33100) | - | 3528138..3530330 (+) | 2193 | WP_022649109.1 | type I secretion system permease/ATPase | - |
| NMC34_RS16890 (FJMB80199_33110) | - | 3530311..3531510 (+) | 1200 | WP_022649110.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| NMC34_RS16895 (FJMB80199_33120) | nudI | 3531644..3532069 (+) | 426 | WP_022649111.1 | nucleoside triphosphatase NudI | - |
| NMC34_RS16900 (FJMB80199_33130) | - | 3532041..3532772 (-) | 732 | WP_022649112.1 | helix-turn-helix transcriptional regulator | - |
| NMC34_RS16905 (FJMB80199_33140) | - | 3532868..3533287 (+) | 420 | WP_022649113.1 | nuclear transport factor 2 family protein | - |
| NMC34_RS16910 (FJMB80199_33150) | - | 3533342..3534523 (-) | 1182 | WP_022649114.1 | PLP-dependent aminotransferase family protein | - |
| NMC34_RS16915 (FJMB80199_33160) | - | 3534544..3535431 (-) | 888 | WP_022649115.1 | LysR substrate-binding domain-containing protein | - |
| NMC34_RS16920 (FJMB80199_33170) | - | 3535529..3536131 (+) | 603 | WP_022649116.1 | short chain dehydrogenase | - |
| NMC34_RS16925 (FJMB80199_33180) | - | 3536128..3536859 (-) | 732 | WP_022649117.1 | class I SAM-dependent methyltransferase | - |
| NMC34_RS16930 (FJMB80199_33190) | - | 3536985..3538364 (-) | 1380 | WP_022649118.1 | amidohydrolase family protein | - |
| NMC34_RS16935 (FJMB80199_33200) | - | 3538366..3539322 (-) | 957 | WP_022649119.1 | carbamate kinase family protein | - |
| NMC34_RS16940 (FJMB80199_33210) | - | 3539319..3540899 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| NMC34_RS16945 (FJMB80199_33220) | - | 3540911..3542326 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| NMC34_RS16950 (FJMB80199_33230) | fdrA | 3542326..3543867 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| NMC34_RS16955 (FJMB80199_33240) | - | 3543976..3544581 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| NMC34_RS16960 (FJMB80199_33250) | - | 3544902..3545831 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| NMC34_RS16965 (FJMB80199_33260) | - | 3545828..3545986 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| NMC34_RS16970 (FJMB80199_33270) | - | 3546166..3546684 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| NMC34_RS16975 (FJMB80199_33280) | - | 3546767..3546946 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| NMC34_RS16980 (FJMB80199_33290) | stpA | 3546984..3547388 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| NMC34_RS16985 (FJMB80199_33300) | alaE | 3547886..3548335 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| NMC34_RS16990 (FJMB80199_33310) | - | 3548368..3548712 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| NMC34_RS16995 (FJMB80199_33320) | - | 3548871..3549197 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| NMC34_RS17000 (FJMB80199_33330) | nrdH | 3549441..3549680 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| NMC34_RS17005 (FJMB80199_33340) | nrdI | 3549677..3550087 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| NMC34_RS17010 (FJMB80199_33350) | nrdE | 3550060..3552204 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| NMC34_RS17015 (FJMB80199_33360) | nrdF | 3552214..3553173 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| NMC34_RS17020 (FJMB80199_33370) | proV | 3553507..3554709 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| NMC34_RS17025 (FJMB80199_33380) | proW | 3554702..3555766 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| NMC34_RS17030 (FJMB80199_33390) | proX | 3555776..3556771 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| NMC34_RS17035 (FJMB80199_33400) | - | 3556981..3558165 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| NMC34_RS17040 (FJMB80199_33410) | emrR | 3558480..3559010 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| NMC34_RS17045 (FJMB80199_33420) | emrA | 3559139..3560311 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| NMC34_RS17050 (FJMB80199_33430) | emrB | 3560328..3561875 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| NMC34_RS17055 (FJMB80199_33440) | - | 3561960..3563066 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| NMC34_RS17060 | - | 3563377..3563520 (+) | 144 | Protein_3337 | hypothetical protein | - |
| NMC34_RS17065 (FJMB80199_33470) | luxS | 3563582..3564097 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| NMC34_RS17070 (FJMB80199_33480) | gshA | 3564250..3565794 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| NMC34_RS17075 (FJMB80199_33490) | - | 3565878..3566306 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| NMC34_RS17080 (FJMB80199_33500) | yqaB | 3566303..3566869 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| NMC34_RS17110 (FJMB80199_33510) | csrA | 3567935..3568120 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| NMC34_RS17115 (FJMB80199_33520) | alaS | 3568362..3570989 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| NMC34_RS17120 (FJMB80199_33530) | recX | 3571121..3571621 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| NMC34_RS17125 (FJMB80199_33540) | recA | 3571690..3572748 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
| NMC34_RS17130 (FJMB80199_33550) | pncC | 3572838..3573335 (-) | 498 | WP_003862172.1 | nicotinamide-nucleotide amidase | - |
| NMC34_RS17135 (FJMB80199_33560) | - | 3573466..3574344 (-) | 879 | WP_022649141.1 | metal ABC transporter substrate-binding protein | - |
| NMC34_RS17140 (FJMB80199_33570) | - | 3574359..3575219 (-) | 861 | WP_022649142.1 | metal ABC transporter permease | - |
| NMC34_RS17145 (FJMB80199_33580) | - | 3575216..3575869 (-) | 654 | WP_022649143.1 | ATP-binding cassette domain-containing protein | - |
| NMC34_RS17150 (FJMB80199_33590) | mltB | 3576138..3577238 (-) | 1101 | WP_022649145.1 | lytic murein transglycosylase B | - |
| NMC34_RS17155 (FJMB80199_33600) | srlA | 3577490..3578053 (+) | 564 | WP_003862164.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| NMC34_RS17160 (FJMB80199_33610) | - | 3578050..3579009 (+) | 960 | WP_022649146.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| NMC34_RS17165 (FJMB80199_33620) | srlB | 3579022..3579384 (+) | 363 | WP_022649147.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| NMC34_RS17170 (FJMB80199_33630) | srlD | 3579399..3580178 (+) | 780 | WP_022649148.1 | sorbitol-6-phosphate dehydrogenase | - |
| NMC34_RS17175 (FJMB80199_33640) | gutM | 3580270..3580629 (+) | 360 | WP_022649149.1 | transcriptional regulator GutM | - |
| NMC34_RS17180 (FJMB80199_33650) | - | 3580693..3581466 (+) | 774 | WP_015571676.1 | DNA-binding transcriptional repressor | - |
| NMC34_RS17185 (FJMB80199_33660) | gutQ | 3581459..3582424 (+) | 966 | WP_022649150.1 | arabinose-5-phosphate isomerase GutQ | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=94616 NMC34_RS17125 WP_022649140.1 3571690..3572748(-) (recA) [Enterobacter hormaechei strain FUJ80199]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=94616 NMC34_RS17125 WP_022649140.1 3571690..3572748(-) (recA) [Enterobacter hormaechei strain FUJ80199]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.