Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | NGK28_RS17000 | Genome accession | NZ_AP025821 |
| Coordinates | 3563590..3564648 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain FUJ80066 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3531219..3564648 | 3563590..3564648 | within | 0 |
Gene organization within MGE regions
Location: 3531219..3564648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGK28_RS16815 (FJMB80066_32870) | - | 3531219..3532799 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| NGK28_RS16820 (FJMB80066_32880) | - | 3532811..3534226 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| NGK28_RS16825 (FJMB80066_32890) | fdrA | 3534226..3535767 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| NGK28_RS16830 (FJMB80066_32900) | - | 3535876..3536481 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| NGK28_RS16835 (FJMB80066_32910) | - | 3536802..3537731 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| NGK28_RS16840 (FJMB80066_32920) | - | 3537728..3537886 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| NGK28_RS16845 (FJMB80066_32930) | - | 3538066..3538584 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| NGK28_RS16850 (FJMB80066_32940) | - | 3538667..3538846 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| NGK28_RS16855 (FJMB80066_32950) | stpA | 3538884..3539288 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| NGK28_RS16860 (FJMB80066_32960) | alaE | 3539786..3540235 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| NGK28_RS16865 (FJMB80066_32970) | - | 3540268..3540612 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| NGK28_RS16870 (FJMB80066_32980) | - | 3540771..3541097 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| NGK28_RS16875 (FJMB80066_32990) | nrdH | 3541341..3541580 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| NGK28_RS16880 (FJMB80066_33000) | nrdI | 3541577..3541987 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| NGK28_RS16885 (FJMB80066_33010) | nrdE | 3541960..3544104 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| NGK28_RS16890 (FJMB80066_33020) | nrdF | 3544114..3545073 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| NGK28_RS16895 (FJMB80066_33030) | proV | 3545407..3546609 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| NGK28_RS16900 (FJMB80066_33040) | proW | 3546602..3547666 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| NGK28_RS16905 (FJMB80066_33050) | proX | 3547676..3548671 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| NGK28_RS16910 (FJMB80066_33060) | - | 3548881..3550065 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| NGK28_RS16915 (FJMB80066_33070) | emrR | 3550380..3550910 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| NGK28_RS16920 (FJMB80066_33080) | emrA | 3551039..3552211 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| NGK28_RS16925 (FJMB80066_33090) | emrB | 3552228..3553775 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| NGK28_RS16930 (FJMB80066_33100) | - | 3553860..3554966 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| NGK28_RS16935 | - | 3555277..3555420 (+) | 144 | Protein_3313 | hypothetical protein | - |
| NGK28_RS16940 (FJMB80066_33130) | luxS | 3555482..3555997 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| NGK28_RS16945 (FJMB80066_33140) | gshA | 3556150..3557694 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| NGK28_RS16950 (FJMB80066_33150) | - | 3557778..3558206 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| NGK28_RS16955 (FJMB80066_33160) | yqaB | 3558203..3558769 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| NGK28_RS16985 (FJMB80066_33170) | csrA | 3559835..3560020 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| NGK28_RS16990 (FJMB80066_33180) | alaS | 3560262..3562889 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| NGK28_RS16995 (FJMB80066_33190) | recX | 3563021..3563521 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| NGK28_RS17000 (FJMB80066_33200) | recA | 3563590..3564648 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=94506 NGK28_RS17000 WP_022649140.1 3563590..3564648(-) (recA) [Enterobacter hormaechei strain FUJ80066]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=94506 NGK28_RS17000 WP_022649140.1 3563590..3564648(-) (recA) [Enterobacter hormaechei strain FUJ80066]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.