Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | NGJ20_RS16750 | Genome accession | NZ_AP025815 |
| Coordinates | 3538033..3539091 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain FUJ80064 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3505662..3539091 | 3538033..3539091 | within | 0 |
Gene organization within MGE regions
Location: 3505662..3539091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGJ20_RS16565 (FJMB80064_32310) | - | 3505662..3507242 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| NGJ20_RS16570 (FJMB80064_32320) | - | 3507254..3508669 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| NGJ20_RS16575 (FJMB80064_32330) | fdrA | 3508669..3510210 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| NGJ20_RS16580 (FJMB80064_32340) | - | 3510319..3510924 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| NGJ20_RS16585 (FJMB80064_32350) | - | 3511245..3512174 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| NGJ20_RS16590 (FJMB80064_32360) | - | 3512171..3512329 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| NGJ20_RS16595 (FJMB80064_32370) | - | 3512509..3513027 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| NGJ20_RS16600 (FJMB80064_32380) | - | 3513110..3513289 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| NGJ20_RS16605 (FJMB80064_32390) | stpA | 3513327..3513731 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| NGJ20_RS16610 (FJMB80064_32400) | alaE | 3514229..3514678 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| NGJ20_RS16615 (FJMB80064_32410) | - | 3514711..3515055 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| NGJ20_RS16620 (FJMB80064_32420) | - | 3515214..3515540 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| NGJ20_RS16625 (FJMB80064_32430) | nrdH | 3515784..3516023 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| NGJ20_RS16630 (FJMB80064_32440) | nrdI | 3516020..3516430 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| NGJ20_RS16635 (FJMB80064_32450) | nrdE | 3516403..3518547 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| NGJ20_RS16640 (FJMB80064_32460) | nrdF | 3518557..3519516 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| NGJ20_RS16645 (FJMB80064_32470) | proV | 3519850..3521052 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| NGJ20_RS16650 (FJMB80064_32480) | proW | 3521045..3522109 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| NGJ20_RS16655 (FJMB80064_32490) | proX | 3522119..3523114 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| NGJ20_RS16660 (FJMB80064_32500) | - | 3523324..3524508 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| NGJ20_RS16665 (FJMB80064_32510) | emrR | 3524823..3525353 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| NGJ20_RS16670 (FJMB80064_32520) | emrA | 3525482..3526654 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| NGJ20_RS16675 (FJMB80064_32530) | emrB | 3526671..3528218 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| NGJ20_RS16680 (FJMB80064_32540) | - | 3528303..3529409 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| NGJ20_RS16685 | - | 3529720..3529863 (+) | 144 | Protein_3263 | hypothetical protein | - |
| NGJ20_RS16690 (FJMB80064_32570) | luxS | 3529925..3530440 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| NGJ20_RS16695 (FJMB80064_32580) | gshA | 3530593..3532137 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| NGJ20_RS16700 (FJMB80064_32590) | - | 3532221..3532649 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| NGJ20_RS16705 (FJMB80064_32600) | yqaB | 3532646..3533212 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| NGJ20_RS16735 (FJMB80064_32610) | csrA | 3534278..3534463 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| NGJ20_RS16740 (FJMB80064_32620) | alaS | 3534705..3537332 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| NGJ20_RS16745 (FJMB80064_32630) | recX | 3537464..3537964 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| NGJ20_RS16750 (FJMB80064_32640) | recA | 3538033..3539091 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=94462 NGJ20_RS16750 WP_022649140.1 3538033..3539091(-) (recA) [Enterobacter hormaechei strain FUJ80064]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=94462 NGJ20_RS16750 WP_022649140.1 3538033..3539091(-) (recA) [Enterobacter hormaechei strain FUJ80064]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.