Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | V5M36_RS08890 | Genome accession | NZ_CP145906 |
| Coordinates | 1959370..1960413 (+) | Length | 347 a.a. |
| NCBI ID | WP_338558066.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. KS-LM10 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1959370..2008213 | 1959370..1960413 | within | 0 |
Gene organization within MGE regions
Location: 1959370..2008213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V5M36_RS08890 (V5M36_08890) | recA | 1959370..1960413 (+) | 1044 | WP_338558066.1 | recombinase RecA | Machinery gene |
| V5M36_RS08895 (V5M36_08895) | - | 1960481..1961113 (+) | 633 | WP_338558067.1 | regulatory protein RecX | - |
| V5M36_RS08905 (V5M36_08905) | - | 1961687..1962526 (+) | 840 | WP_338564124.1 | YbgF trimerization domain-containing protein | - |
| V5M36_RS08910 (V5M36_08910) | - | 1962969..1964507 (-) | 1539 | WP_338558068.1 | TerC family protein | - |
| V5M36_RS08915 (V5M36_08915) | - | 1965275..1965739 (+) | 465 | WP_338558070.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| V5M36_RS08920 (V5M36_08920) | - | 1965770..1966003 (-) | 234 | Protein_1721 | DUF159 family protein | - |
| V5M36_RS08925 (V5M36_08925) | - | 1966168..1967379 (+) | 1212 | WP_338558071.1 | integrase arm-type DNA-binding domain-containing protein | - |
| V5M36_RS08930 (V5M36_08930) | - | 1967380..1967559 (-) | 180 | WP_338558073.1 | hypothetical protein | - |
| V5M36_RS08935 (V5M36_08935) | - | 1967667..1967912 (+) | 246 | WP_338558074.1 | hypothetical protein | - |
| V5M36_RS08940 (V5M36_08940) | - | 1968291..1969085 (-) | 795 | WP_338558075.1 | glycosyl hydrolase 108 family protein | - |
| V5M36_RS08945 (V5M36_08945) | - | 1969072..1969578 (-) | 507 | WP_338558076.1 | hypothetical protein | - |
| V5M36_RS08950 (V5M36_08950) | - | 1969652..1970704 (-) | 1053 | WP_338558077.1 | acyltransferase | - |
| V5M36_RS08955 (V5M36_08955) | - | 1970806..1971735 (-) | 930 | WP_338558078.1 | hypothetical protein | - |
| V5M36_RS08960 (V5M36_08960) | - | 1971736..1973613 (-) | 1878 | WP_338558079.1 | sialidase family protein | - |
| V5M36_RS08965 (V5M36_08965) | - | 1973674..1974297 (-) | 624 | WP_338558080.1 | tail fiber protein | - |
| V5M36_RS08970 (V5M36_08970) | - | 1974287..1974877 (-) | 591 | WP_338558082.1 | DUF2612 domain-containing protein | - |
| V5M36_RS08975 (V5M36_08975) | - | 1974877..1976061 (-) | 1185 | WP_338558085.1 | baseplate J/gp47 family protein | - |
| V5M36_RS08980 (V5M36_08980) | - | 1976058..1976420 (-) | 363 | WP_338558087.1 | hypothetical protein | - |
| V5M36_RS08985 (V5M36_08985) | - | 1976459..1977133 (-) | 675 | WP_338558089.1 | Gp138 family membrane-puncturing spike protein | - |
| V5M36_RS08990 (V5M36_08990) | - | 1977133..1978095 (-) | 963 | WP_338558092.1 | hypothetical protein | - |
| V5M36_RS08995 (V5M36_08995) | - | 1978095..1978391 (-) | 297 | WP_338558094.1 | hypothetical protein | - |
| V5M36_RS09000 (V5M36_09000) | - | 1978395..1978943 (-) | 549 | WP_338558096.1 | phage baseplate protein | - |
| V5M36_RS09005 (V5M36_09005) | - | 1979008..1979403 (-) | 396 | WP_338558098.1 | hypothetical protein | - |
| V5M36_RS09010 (V5M36_09010) | - | 1979406..1979594 (-) | 189 | WP_338558100.1 | hypothetical protein | - |
| V5M36_RS09015 (V5M36_09015) | - | 1979723..1980070 (+) | 348 | WP_338558102.1 | lysozyme inhibitor LprI family protein | - |
| V5M36_RS09020 (V5M36_09020) | - | 1980067..1982196 (-) | 2130 | WP_338558104.1 | phage tail tape measure protein | - |
| V5M36_RS09025 (V5M36_09025) | - | 1982208..1982366 (-) | 159 | WP_338558106.1 | hypothetical protein | - |
| V5M36_RS09030 (V5M36_09030) | - | 1982402..1982869 (-) | 468 | WP_338558108.1 | phage tail assembly chaperone | - |
| V5M36_RS09035 (V5M36_09035) | - | 1982875..1983321 (-) | 447 | WP_338558110.1 | phage protein | - |
| V5M36_RS09040 (V5M36_09040) | - | 1983334..1984455 (-) | 1122 | WP_338558112.1 | DUF3383 family protein | - |
| V5M36_RS09045 (V5M36_09045) | - | 1984465..1985001 (-) | 537 | WP_338558114.1 | hypothetical protein | - |
| V5M36_RS09050 (V5M36_09050) | - | 1985004..1985375 (-) | 372 | WP_338558116.1 | hypothetical protein | - |
| V5M36_RS09055 (V5M36_09055) | - | 1985375..1985854 (-) | 480 | WP_338558118.1 | hypothetical protein | - |
| V5M36_RS09060 (V5M36_09060) | - | 1985851..1986237 (-) | 387 | WP_338558120.1 | DUF4054 domain-containing protein | - |
| V5M36_RS09065 (V5M36_09065) | - | 1986237..1986617 (-) | 381 | WP_338558122.1 | hypothetical protein | - |
| V5M36_RS09070 (V5M36_09070) | - | 1986630..1987649 (-) | 1020 | WP_338558124.1 | DUF2184 domain-containing protein | - |
| V5M36_RS09075 (V5M36_09075) | - | 1987713..1988192 (-) | 480 | WP_338558126.1 | hypothetical protein | - |
| V5M36_RS09080 (V5M36_09080) | - | 1988192..1989514 (-) | 1323 | WP_338558128.1 | DUF2213 domain-containing protein | - |
| V5M36_RS09085 (V5M36_09085) | - | 1989685..1990281 (-) | 597 | WP_338564127.1 | phage minor head protein | - |
| V5M36_RS09090 (V5M36_09090) | - | 1990340..1991758 (-) | 1419 | WP_338558130.1 | DUF1073 domain-containing protein | - |
| V5M36_RS09095 (V5M36_09095) | - | 1991771..1993426 (-) | 1656 | WP_338558132.1 | terminase | - |
| V5M36_RS09100 (V5M36_09100) | - | 1993423..1993920 (-) | 498 | WP_338558134.1 | DUF2280 domain-containing protein | - |
| V5M36_RS09105 (V5M36_09105) | - | 1993981..1994622 (-) | 642 | WP_338558136.1 | putative metallopeptidase | - |
| V5M36_RS09110 (V5M36_09110) | - | 1994582..1995019 (-) | 438 | WP_338558138.1 | hypothetical protein | - |
| V5M36_RS09115 (V5M36_09115) | - | 1995060..1995845 (-) | 786 | WP_338558141.1 | DUF2971 domain-containing protein | - |
| V5M36_RS09120 (V5M36_09120) | - | 1997556..1997882 (-) | 327 | WP_338558143.1 | hypothetical protein | - |
| V5M36_RS09125 (V5M36_09125) | - | 1997941..1998420 (-) | 480 | WP_338558144.1 | hypothetical protein | - |
| V5M36_RS09130 (V5M36_09130) | - | 1998422..1998826 (-) | 405 | WP_338558146.1 | DUF559 domain-containing protein | - |
| V5M36_RS09135 (V5M36_09135) | - | 1998823..1999083 (-) | 261 | WP_338558148.1 | hypothetical protein | - |
| V5M36_RS09140 (V5M36_09140) | - | 1999080..2000039 (-) | 960 | WP_338558150.1 | helix-turn-helix domain-containing protein | - |
| V5M36_RS09145 (V5M36_09145) | - | 2000036..2000338 (-) | 303 | WP_338558153.1 | hypothetical protein | - |
| V5M36_RS09150 (V5M36_09150) | - | 2000335..2000592 (-) | 258 | WP_338558154.1 | hypothetical protein | - |
| V5M36_RS09155 (V5M36_09155) | - | 2000642..2000917 (-) | 276 | WP_338558157.1 | hypothetical protein | - |
| V5M36_RS09160 (V5M36_09160) | - | 2000926..2001174 (-) | 249 | WP_338558160.1 | hypothetical protein | - |
| V5M36_RS09165 (V5M36_09165) | - | 2001292..2002056 (+) | 765 | WP_338558162.1 | S24 family peptidase | - |
| V5M36_RS09170 (V5M36_09170) | - | 2002067..2002282 (+) | 216 | WP_338558164.1 | hypothetical protein | - |
| V5M36_RS09175 (V5M36_09175) | - | 2002376..2002678 (+) | 303 | WP_338558166.1 | hypothetical protein | - |
| V5M36_RS09180 (V5M36_09180) | - | 2002801..2003193 (+) | 393 | WP_338558168.1 | DUF6232 family protein | - |
| V5M36_RS09185 (V5M36_09185) | - | 2003280..2003558 (+) | 279 | WP_338558170.1 | hypothetical protein | - |
| V5M36_RS09190 (V5M36_09190) | - | 2003553..2003954 (-) | 402 | WP_338558172.1 | hypothetical protein | - |
| V5M36_RS09195 (V5M36_09195) | - | 2004151..2004582 (+) | 432 | WP_338558174.1 | hypothetical protein | - |
| V5M36_RS09200 (V5M36_09200) | - | 2004582..2005658 (+) | 1077 | WP_338558177.1 | ATP-binding protein | - |
| V5M36_RS09205 (V5M36_09205) | - | 2005655..2006896 (+) | 1242 | WP_338558179.1 | hypothetical protein | - |
| V5M36_RS09210 (V5M36_09210) | - | 2006893..2007036 (+) | 144 | WP_338558181.1 | hypothetical protein | - |
| V5M36_RS09215 (V5M36_09215) | - | 2007036..2007308 (+) | 273 | WP_338558183.1 | hypothetical protein | - |
| V5M36_RS09220 (V5M36_09220) | - | 2007395..2007616 (+) | 222 | WP_067658070.1 | hypothetical protein | - |
| V5M36_RS09225 (V5M36_09225) | - | 2007755..2008198 (-) | 444 | Protein_1782 | SOS response-associated peptidase family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37594.25 Da Isoelectric Point: 5.7621
>NTDB_id=941065 V5M36_RS08890 WP_338558066.1 1959370..1960413(+) (recA) [Acinetobacter sp. KS-LM10]
MDENKSKALTAALGQIEKQFGKNTIMRLGDNNVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASIRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVAQELVQKAGAWYSYQSNKIGQGKNNVIRHLEENPALAIELDR
MIRERLLVTATPPAAEEKQDEPDLLDV
MDENKSKALTAALGQIEKQFGKNTIMRLGDNNVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASIRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVAQELVQKAGAWYSYQSNKIGQGKNNVIRHLEENPALAIELDR
MIRERLLVTATPPAAEEKQDEPDLLDV
Nucleotide
Download Length: 1044 bp
>NTDB_id=941065 V5M36_RS08890 WP_338558066.1 1959370..1960413(+) (recA) [Acinetobacter sp. KS-LM10]
ATGGATGAGAACAAAAGCAAAGCGCTCACAGCTGCTTTAGGCCAAATTGAAAAACAATTTGGTAAAAACACAATTATGCG
CTTAGGCGATAATAATGTTCAAGCAGTTGAAGCTGTATCTACAGGTTCATTAACCCTAGATATCGCTTTAGGTATCGGCG
GTTTACCCAAAGGGCGTATTGTTGAAATTTACGGTCCAGAATCATCAGGTAAAACCACCATGACATTGCAAGCTATTGCG
CAATGTCAAAAAGCTGGTGGTACTTGTGCATTTATCGATGCTGAACATGCATTAGACCCACAATATGCTCGTAAACTCGG
TGTTGATATCGATAATCTTTTGGTCTCTCAACCCGACCATGGTGAACAAGCACTTGAAATTGCAGACATGCTGGTACGTT
CTGGCGCTGTAGACATGATCGTTGTCGATTCAGTTGCTGCCTTAACCCCTAAAGCCGAAATTGAAGGCGAAATGGGTGAT
TCTCATATGGGCTTACAAGCACGTCTGATGAGTCAAGCGCTCCGTAAAATTACGGGTAATGCAAAACGCTCAAATTGTAT
GGTCATTTTCATTAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAGCCCTGAAACGACAACAGGTGGTAACGCAC
TTAAATTCTATGCCTCTATTCGTCTTGATATTCGTCGTATTGGTCAAGTCAAAGAAGGTGATGAAATTGTCGGCTCAGAA
ACACGCGTTAAAGTCGTGAAAAACAAAATGGCACCGCCTTTCCGCGAAGCACTTTTCCAAATTCTTTATGGTAAAGGTGT
TAACCACCTAGGTGAATTGGTCGATTTAGCTGTTGCTCAGGAATTGGTTCAAAAAGCAGGTGCTTGGTATTCTTATCAAA
GCAACAAAATTGGTCAAGGTAAAAATAATGTGATTCGTCACCTTGAAGAAAATCCTGCACTTGCAATCGAACTTGATCGC
ATGATTCGCGAACGACTTCTTGTAACAGCAACGCCGCCAGCCGCTGAAGAAAAACAAGATGAACCCGATCTTTTAGATGT
TTAA
ATGGATGAGAACAAAAGCAAAGCGCTCACAGCTGCTTTAGGCCAAATTGAAAAACAATTTGGTAAAAACACAATTATGCG
CTTAGGCGATAATAATGTTCAAGCAGTTGAAGCTGTATCTACAGGTTCATTAACCCTAGATATCGCTTTAGGTATCGGCG
GTTTACCCAAAGGGCGTATTGTTGAAATTTACGGTCCAGAATCATCAGGTAAAACCACCATGACATTGCAAGCTATTGCG
CAATGTCAAAAAGCTGGTGGTACTTGTGCATTTATCGATGCTGAACATGCATTAGACCCACAATATGCTCGTAAACTCGG
TGTTGATATCGATAATCTTTTGGTCTCTCAACCCGACCATGGTGAACAAGCACTTGAAATTGCAGACATGCTGGTACGTT
CTGGCGCTGTAGACATGATCGTTGTCGATTCAGTTGCTGCCTTAACCCCTAAAGCCGAAATTGAAGGCGAAATGGGTGAT
TCTCATATGGGCTTACAAGCACGTCTGATGAGTCAAGCGCTCCGTAAAATTACGGGTAATGCAAAACGCTCAAATTGTAT
GGTCATTTTCATTAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAGCCCTGAAACGACAACAGGTGGTAACGCAC
TTAAATTCTATGCCTCTATTCGTCTTGATATTCGTCGTATTGGTCAAGTCAAAGAAGGTGATGAAATTGTCGGCTCAGAA
ACACGCGTTAAAGTCGTGAAAAACAAAATGGCACCGCCTTTCCGCGAAGCACTTTTCCAAATTCTTTATGGTAAAGGTGT
TAACCACCTAGGTGAATTGGTCGATTTAGCTGTTGCTCAGGAATTGGTTCAAAAAGCAGGTGCTTGGTATTCTTATCAAA
GCAACAAAATTGGTCAAGGTAAAAATAATGTGATTCGTCACCTTGAAGAAAATCCTGCACTTGCAATCGAACTTGATCGC
ATGATTCGCGAACGACTTCTTGTAACAGCAACGCCGCCAGCCGCTGAAGAAAAACAAGATGAACCCGATCTTTTAGATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.