Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ORY85_RS00705 | Genome accession | NZ_CP145606 |
| Coordinates | 127395..128486 (-) | Length | 363 a.a. |
| NCBI ID | WP_274570612.1 | Uniprot ID | - |
| Organism | Neisseria leonii strain 3986 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 90253..128486 | 127395..128486 | within | 0 |
Gene organization within MGE regions
Location: 90253..128486
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORY85_RS00465 (ORY85_00465) | - | 90253..90735 (+) | 483 | WP_274570679.1 | HK97 gp10 family phage protein | - |
| ORY85_RS00470 (ORY85_00470) | - | 90732..91346 (+) | 615 | WP_274570678.1 | hypothetical protein | - |
| ORY85_RS00475 (ORY85_00475) | - | 91343..91516 (+) | 174 | WP_274570677.1 | DUF2635 domain-containing protein | - |
| ORY85_RS00480 (ORY85_00480) | - | 91516..93018 (+) | 1503 | WP_274570676.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| ORY85_RS00485 (ORY85_00485) | - | 93030..93380 (+) | 351 | WP_274570675.1 | phage tail tube protein | - |
| ORY85_RS00490 (ORY85_00490) | - | 93508..93690 (+) | 183 | WP_274570674.1 | type II toxin-antitoxin system HicA family toxin | - |
| ORY85_RS00495 (ORY85_00495) | - | 93741..94157 (+) | 417 | WP_274570673.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| ORY85_RS00500 (ORY85_00500) | - | 94248..94445 (+) | 198 | WP_274570672.1 | hypothetical protein | - |
| ORY85_RS00505 (ORY85_00505) | - | 94540..95451 (+) | 912 | WP_274570671.1 | SAP domain-containing protein | - |
| ORY85_RS00510 (ORY85_00510) | - | 95556..95846 (+) | 291 | WP_274570670.1 | phage tail assembly protein | - |
| ORY85_RS00515 (ORY85_00515) | - | 95967..98018 (+) | 2052 | WP_274570669.1 | phage tail tape measure protein | - |
| ORY85_RS00520 (ORY85_00520) | - | 98018..99322 (+) | 1305 | WP_274570668.1 | DNA circularization protein | - |
| ORY85_RS00525 (ORY85_00525) | - | 99309..100358 (+) | 1050 | WP_274570667.1 | phage baseplate assembly protein | - |
| ORY85_RS00530 (ORY85_00530) | - | 100355..100942 (+) | 588 | WP_274570666.1 | phage baseplate assembly protein V | - |
| ORY85_RS00535 (ORY85_00535) | - | 100939..101331 (+) | 393 | WP_274570665.1 | phage GP46 family protein | - |
| ORY85_RS00540 (ORY85_00540) | - | 101321..102415 (+) | 1095 | WP_274570664.1 | baseplate J/gp47 family protein | - |
| ORY85_RS00545 (ORY85_00545) | - | 102403..102984 (+) | 582 | WP_274570663.1 | putative phage tail protein | - |
| ORY85_RS00550 (ORY85_00550) | - | 102981..104315 (+) | 1335 | WP_274570662.1 | hypothetical protein | - |
| ORY85_RS00555 (ORY85_00555) | - | 104324..104953 (+) | 630 | WP_274570661.1 | phage tail protein | - |
| ORY85_RS00560 (ORY85_00560) | - | 104950..105405 (+) | 456 | WP_274570660.1 | hypothetical protein | - |
| ORY85_RS00565 (ORY85_00565) | - | 105416..105949 (+) | 534 | WP_274570659.1 | hypothetical protein | - |
| ORY85_RS00570 (ORY85_00570) | - | 105939..106355 (+) | 417 | WP_274570658.1 | hypothetical protein | - |
| ORY85_RS00575 (ORY85_00575) | - | 106345..106863 (+) | 519 | WP_274570656.1 | lysis system i-spanin subunit Rz | - |
| ORY85_RS00580 (ORY85_00580) | - | 106841..107311 (+) | 471 | WP_274570654.1 | lysozyme | - |
| ORY85_RS00585 (ORY85_00585) | - | 107381..107740 (-) | 360 | WP_274570652.1 | helix-turn-helix domain-containing protein | - |
| ORY85_RS00590 (ORY85_00590) | - | 107849..108043 (+) | 195 | WP_274570650.1 | helix-turn-helix transcriptional regulator | - |
| ORY85_RS00595 (ORY85_00595) | - | 108129..108605 (+) | 477 | WP_274570649.1 | phage regulatory CII family protein | - |
| ORY85_RS00600 (ORY85_00600) | - | 108586..108810 (+) | 225 | WP_274570647.1 | hypothetical protein | - |
| ORY85_RS00605 (ORY85_00605) | - | 108761..109045 (+) | 285 | WP_274570645.1 | hypothetical protein | - |
| ORY85_RS00610 (ORY85_00610) | - | 109042..109704 (+) | 663 | WP_274570643.1 | tyrosine-type recombinase/integrase | - |
| ORY85_RS00615 (ORY85_00615) | - | 109705..110094 (+) | 390 | WP_274570642.1 | hypothetical protein | - |
| ORY85_RS00620 (ORY85_00620) | - | 110091..112886 (+) | 2796 | WP_274570641.1 | toprim domain-containing protein | - |
| ORY85_RS00625 (ORY85_00625) | - | 112932..113219 (+) | 288 | WP_274570639.1 | hypothetical protein | - |
| ORY85_RS00630 (ORY85_00630) | - | 113236..113451 (+) | 216 | WP_274570637.1 | hypothetical protein | - |
| ORY85_RS00635 (ORY85_00635) | - | 113472..113927 (+) | 456 | WP_274570635.1 | hypothetical protein | - |
| ORY85_RS10575 | - | 114172..114282 (+) | 111 | WP_367575890.1 | Com family DNA-binding transcriptional regulator | - |
| ORY85_RS00640 (ORY85_00640) | - | 114326..115105 (+) | 780 | WP_274570628.1 | DNA adenine methylase | - |
| ORY85_RS00645 (ORY85_00645) | - | 115135..115398 (-) | 264 | WP_274570626.1 | hypothetical protein | - |
| ORY85_RS00650 (ORY85_00650) | - | 115650..116645 (+) | 996 | WP_274570624.1 | tyrosine-type recombinase/integrase | - |
| ORY85_RS00655 (ORY85_00655) | - | 116843..117343 (+) | 501 | WP_274570622.1 | hypothetical protein | - |
| ORY85_RS10580 | - | 117340..118353 (+) | 1014 | Protein_129 | recombinase family protein | - |
| ORY85_RS00665 (ORY85_00665) | - | 119094..119993 (+) | 900 | WP_274570620.1 | recombination-associated protein RdgC | - |
| ORY85_RS00670 (ORY85_00670) | dcd | 120023..120589 (+) | 567 | WP_274570619.1 | dCTP deaminase | - |
| ORY85_RS00675 (ORY85_00675) | - | 120697..121341 (-) | 645 | WP_274570618.1 | DUF4375 domain-containing protein | - |
| ORY85_RS00680 (ORY85_00680) | - | 122136..122618 (-) | 483 | WP_274570617.1 | GNAT family N-acetyltransferase | - |
| ORY85_RS00685 (ORY85_00685) | - | 122778..123923 (-) | 1146 | WP_274570616.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| ORY85_RS00690 (ORY85_00690) | - | 123943..124797 (-) | 855 | WP_274570615.1 | NgoMIV family type II restriction endonuclease | - |
| ORY85_RS00695 (ORY85_00695) | - | 124794..125738 (-) | 945 | WP_274570614.1 | DNA cytosine methyltransferase | - |
| ORY85_RS00700 (ORY85_00700) | trpE | 125807..127282 (-) | 1476 | WP_274570613.1 | anthranilate synthase component I | - |
| ORY85_RS00705 (ORY85_00705) | recA | 127395..128486 (-) | 1092 | WP_274570612.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 363 a.a. Molecular weight: 39107.60 Da Isoelectric Point: 4.9892
>NTDB_id=938997 ORY85_RS00705 WP_274570612.1 127395..128486(-) (recA) [Neisseria leonii strain 3986]
MADDKKNKNTFTLPGTAEEKNKALAAALAAIEKNFGKGSIMKMDGSQQEENLEVFSTGSIGLDLALGVGGLPRGRIVEIF
GPESSGKTTLCLESIAQCQKSGGVCAFIDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGLDMVVVDS
VAALVPKAEIEGEMGDSHVGLHARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDI
RRGGQIKKGDDILGNETKVKVIKNKVAPPFRQADFDILYGEGISWEGELVDWGVKYGIVEKSGAWYSYNGAKIGQGKDNV
RIWLKENPEVAAEIDAKIRAAAGTNMQITEGIIDDTDGEAPEE
MADDKKNKNTFTLPGTAEEKNKALAAALAAIEKNFGKGSIMKMDGSQQEENLEVFSTGSIGLDLALGVGGLPRGRIVEIF
GPESSGKTTLCLESIAQCQKSGGVCAFIDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGLDMVVVDS
VAALVPKAEIEGEMGDSHVGLHARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDI
RRGGQIKKGDDILGNETKVKVIKNKVAPPFRQADFDILYGEGISWEGELVDWGVKYGIVEKSGAWYSYNGAKIGQGKDNV
RIWLKENPEVAAEIDAKIRAAAGTNMQITEGIIDDTDGEAPEE
Nucleotide
Download Length: 1092 bp
>NTDB_id=938997 ORY85_RS00705 WP_274570612.1 127395..128486(-) (recA) [Neisseria leonii strain 3986]
ATGGCTGACGACAAAAAAAACAAAAACACCTTCACCCTCCCCGGCACGGCCGAAGAAAAAAACAAAGCCTTGGCCGCGGC
CTTGGCCGCGATTGAAAAAAACTTCGGCAAAGGCTCCATCATGAAAATGGACGGCAGCCAGCAGGAAGAAAATCTGGAAG
TATTCTCCACCGGCTCCATCGGCCTGGATCTGGCACTCGGTGTAGGCGGTCTGCCGCGCGGCCGCATCGTCGAAATCTTC
GGCCCCGAATCTTCGGGTAAAACCACCCTGTGCCTGGAATCCATCGCCCAATGCCAGAAAAGCGGCGGCGTCTGCGCCTT
TATCGATGCCGAACACGCATTTGATCCCGTTTATGCGCGCAAACTCGGCGTGAAAGTCGAAGAACTCTACCTTTCACAGC
CGGACACCGGCGAGCAGGCTCTGGAAATCTGCGACACGCTGGTGCGCAGCGGCGGCTTGGATATGGTGGTGGTCGATTCT
GTGGCGGCGCTGGTGCCCAAAGCCGAAATCGAAGGCGAAATGGGCGACAGCCATGTCGGCCTGCATGCCCGCCTGATGAG
CCAGGCCCTGCGCAAACTTACCGGCCACATCAAAAAAACCAACACTCTGGTGGTGTTTATCAACCAAATCCGCATGAAAA
TCGGCGTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCACTCAAATTCTATGCTTCCGTGCGCCTCGATATC
CGCCGTGGCGGCCAAATCAAAAAAGGCGACGACATTCTCGGCAATGAAACCAAAGTCAAAGTCATCAAAAACAAAGTCGC
CCCCCCTTTCCGTCAAGCCGATTTCGACATTCTCTACGGCGAAGGCATCAGCTGGGAAGGCGAACTGGTGGACTGGGGCG
TGAAATACGGCATCGTCGAAAAATCCGGCGCATGGTACAGCTACAACGGTGCCAAAATCGGACAGGGCAAAGACAACGTA
CGTATCTGGCTGAAAGAAAATCCCGAGGTTGCCGCCGAAATCGATGCCAAAATCCGCGCGGCAGCCGGTACCAACATGCA
GATTACCGAAGGTATCATCGACGATACCGACGGCGAAGCACCCGAAGAATAA
ATGGCTGACGACAAAAAAAACAAAAACACCTTCACCCTCCCCGGCACGGCCGAAGAAAAAAACAAAGCCTTGGCCGCGGC
CTTGGCCGCGATTGAAAAAAACTTCGGCAAAGGCTCCATCATGAAAATGGACGGCAGCCAGCAGGAAGAAAATCTGGAAG
TATTCTCCACCGGCTCCATCGGCCTGGATCTGGCACTCGGTGTAGGCGGTCTGCCGCGCGGCCGCATCGTCGAAATCTTC
GGCCCCGAATCTTCGGGTAAAACCACCCTGTGCCTGGAATCCATCGCCCAATGCCAGAAAAGCGGCGGCGTCTGCGCCTT
TATCGATGCCGAACACGCATTTGATCCCGTTTATGCGCGCAAACTCGGCGTGAAAGTCGAAGAACTCTACCTTTCACAGC
CGGACACCGGCGAGCAGGCTCTGGAAATCTGCGACACGCTGGTGCGCAGCGGCGGCTTGGATATGGTGGTGGTCGATTCT
GTGGCGGCGCTGGTGCCCAAAGCCGAAATCGAAGGCGAAATGGGCGACAGCCATGTCGGCCTGCATGCCCGCCTGATGAG
CCAGGCCCTGCGCAAACTTACCGGCCACATCAAAAAAACCAACACTCTGGTGGTGTTTATCAACCAAATCCGCATGAAAA
TCGGCGTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCACTCAAATTCTATGCTTCCGTGCGCCTCGATATC
CGCCGTGGCGGCCAAATCAAAAAAGGCGACGACATTCTCGGCAATGAAACCAAAGTCAAAGTCATCAAAAACAAAGTCGC
CCCCCCTTTCCGTCAAGCCGATTTCGACATTCTCTACGGCGAAGGCATCAGCTGGGAAGGCGAACTGGTGGACTGGGGCG
TGAAATACGGCATCGTCGAAAAATCCGGCGCATGGTACAGCTACAACGGTGCCAAAATCGGACAGGGCAAAGACAACGTA
CGTATCTGGCTGAAAGAAAATCCCGAGGTTGCCGCCGAAATCGATGCCAAAATCCGCGCGGCAGCCGGTACCAACATGCA
GATTACCGAAGGTATCATCGACGATACCGACGGCGAAGCACCCGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.