Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | F6I27_RS12190 | Genome accession | NZ_CP145134 |
| Coordinates | 685758..686873 (+) | Length | 371 a.a. |
| NCBI ID | WP_013669682.1 | Uniprot ID | F2I5Q4 |
| Organism | Aerococcus tenax strain UMB7049 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 681208..699801 | 685758..686873 | within | 0 |
Gene organization within MGE regions
Location: 681208..699801
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6I27_RS12175 (F6I27_0003090) | - | 681208..683562 (+) | 2355 | WP_111851695.1 | DNA translocase FtsK | - |
| F6I27_RS12180 (F6I27_0003095) | pgsA | 683808..684386 (+) | 579 | WP_111851694.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| F6I27_RS12185 (F6I27_0003100) | - | 684438..685676 (+) | 1239 | WP_111851693.1 | competence/damage-inducible protein A | - |
| F6I27_RS12190 (F6I27_0003105) | recA | 685758..686873 (+) | 1116 | WP_013669682.1 | recombinase RecA | Machinery gene |
| F6I27_RS12195 (F6I27_0003110) | rny | 687158..688729 (+) | 1572 | WP_064292335.1 | ribonuclease Y | - |
| F6I27_RS12200 (F6I27_0003115) | - | 689383..690540 (-) | 1158 | WP_111851692.1 | site-specific integrase | - |
| F6I27_RS12205 (F6I27_0003120) | - | 690655..691122 (-) | 468 | WP_111851691.1 | helix-turn-helix transcriptional regulator | - |
| F6I27_RS12210 (F6I27_0003125) | - | 691260..691466 (+) | 207 | WP_111851690.1 | transcriptional regulator | - |
| F6I27_RS12215 (F6I27_0003130) | - | 691978..692604 (+) | 627 | WP_111851689.1 | Rha family transcriptional regulator | - |
| F6I27_RS12220 (F6I27_0003135) | - | 692618..692767 (+) | 150 | WP_181573607.1 | hypothetical protein | - |
| F6I27_RS12225 (F6I27_0003140) | - | 692798..693142 (+) | 345 | WP_111851688.1 | hypothetical protein | - |
| F6I27_RS12230 (F6I27_0003145) | - | 693310..693969 (+) | 660 | WP_111851687.1 | Fic family protein | - |
| F6I27_RS12235 (F6I27_0003150) | - | 694085..694489 (+) | 405 | WP_111851686.1 | hypothetical protein | - |
| F6I27_RS12240 (F6I27_0003155) | - | 694502..694786 (+) | 285 | WP_060778030.1 | helix-turn-helix domain-containing protein | - |
| F6I27_RS12245 (F6I27_0003160) | - | 694942..695427 (+) | 486 | WP_111851685.1 | hypothetical protein | - |
| F6I27_RS12250 (F6I27_0003165) | - | 695437..696375 (+) | 939 | WP_111851684.1 | primase alpha helix C-terminal domain-containing protein | - |
| F6I27_RS12255 (F6I27_0003170) | - | 696368..697846 (+) | 1479 | WP_111851683.1 | DNA primase family protein | - |
| F6I27_RS12260 (F6I27_0003175) | - | 698164..698412 (+) | 249 | WP_111851682.1 | hypothetical protein | - |
| F6I27_RS12265 (F6I27_0003180) | - | 698424..698666 (+) | 243 | WP_111851681.1 | hypothetical protein | - |
| F6I27_RS12270 (F6I27_0003185) | - | 698680..698952 (+) | 273 | WP_111851680.1 | hypothetical protein | - |
| F6I27_RS12275 (F6I27_0003190) | - | 698939..699208 (+) | 270 | WP_111851679.1 | hypothetical protein | - |
| F6I27_RS12280 (F6I27_0003195) | - | 699367..699801 (+) | 435 | WP_111851678.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 40078.80 Da Isoelectric Point: 4.3539
>NTDB_id=937346 F6I27_RS12190 WP_013669682.1 685758..686873(+) (recA) [Aerococcus tenax strain UMB7049]
MSTSHDANRQKALDQALKQIEKNFGKGAIMKMGESTDTQVSTVPSGSLSLDIALGVGGYPRGRIIEVYGPESSGKTTVAL
HAVAEVQKQGGIAAFIDAENALDPEYARALGVDIDELLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIEG
EMGDSHVGLQARLMSQALRKLSGSINKTKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRGERIKSGQDI
IGNRTKIKVVKNKVAPPFKVAEVDIMYGQGISQAGELVDLAADMDIIKKSGSWYSYGDDRIGQGRENAKLYLTENPDIFK
EIDSKVRAEYGFGPAVEDDDSEDETTNEEAKNDSSSDEENETLDLFNDDEE
MSTSHDANRQKALDQALKQIEKNFGKGAIMKMGESTDTQVSTVPSGSLSLDIALGVGGYPRGRIIEVYGPESSGKTTVAL
HAVAEVQKQGGIAAFIDAENALDPEYARALGVDIDELLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIEG
EMGDSHVGLQARLMSQALRKLSGSINKTKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRGERIKSGQDI
IGNRTKIKVVKNKVAPPFKVAEVDIMYGQGISQAGELVDLAADMDIIKKSGSWYSYGDDRIGQGRENAKLYLTENPDIFK
EIDSKVRAEYGFGPAVEDDDSEDETTNEEAKNDSSSDEENETLDLFNDDEE
Nucleotide
Download Length: 1116 bp
>NTDB_id=937346 F6I27_RS12190 WP_013669682.1 685758..686873(+) (recA) [Aerococcus tenax strain UMB7049]
ATGAGTACATCACATGATGCAAACCGCCAAAAGGCTTTAGACCAGGCCCTTAAACAAATTGAAAAAAACTTTGGTAAGGG
AGCTATAATGAAGATGGGAGAATCAACGGATACTCAGGTGTCGACTGTTCCGTCAGGCTCCTTATCCTTAGATATTGCCC
TAGGAGTCGGAGGTTATCCGCGTGGACGAATTATTGAAGTCTACGGTCCAGAATCTTCTGGGAAAACCACTGTTGCCCTA
CATGCTGTTGCCGAGGTTCAAAAACAAGGTGGAATTGCTGCCTTTATTGATGCTGAGAACGCCTTAGACCCTGAATACGC
TAGAGCTTTGGGGGTTGACATTGATGAGCTATTACTCTCCCAACCGGATACTGGTGAACAAGGGTTAGAAATTGCTGATG
CCTTAGTGTCCTCTGGTGCGATTGATATTGTCGTTGTCGATTCTGTTGCTGCCTTAGTTCCACGGGCTGAAATTGAAGGT
GAGATGGGGGACTCCCATGTGGGGCTCCAAGCTCGCTTGATGTCTCAAGCCCTACGGAAGTTATCGGGCTCCATTAATAA
GACGAAAACCATTGCCATGTTTATTAACCAGATTCGTGAAAAAGTAGGTGTCATGTTTGGGAACCCAGAAACCACCCCAG
GGGGAAGGGCCCTAAAATTTTATTCCACTATTCGTCTAGAAGTTAGACGCGGGGAACGGATCAAATCCGGTCAGGATATT
ATTGGTAACCGCACTAAGATTAAAGTTGTAAAAAATAAGGTAGCTCCGCCATTTAAGGTTGCTGAAGTGGATATTATGTA
TGGGCAAGGAATTTCTCAAGCGGGTGAATTAGTTGATTTAGCTGCTGACATGGATATCATTAAGAAGAGTGGCTCTTGGT
ATTCTTACGGGGATGACCGGATTGGCCAAGGACGCGAGAATGCCAAACTATATCTCACCGAAAACCCTGACATATTTAAG
GAAATTGATAGTAAGGTTCGAGCAGAGTATGGTTTTGGTCCAGCTGTTGAAGATGACGATTCAGAGGATGAAACCACCAA
TGAAGAAGCCAAAAACGATTCATCAAGTGATGAAGAAAATGAAACCCTAGATTTATTTAACGATGATGAAGAATAA
ATGAGTACATCACATGATGCAAACCGCCAAAAGGCTTTAGACCAGGCCCTTAAACAAATTGAAAAAAACTTTGGTAAGGG
AGCTATAATGAAGATGGGAGAATCAACGGATACTCAGGTGTCGACTGTTCCGTCAGGCTCCTTATCCTTAGATATTGCCC
TAGGAGTCGGAGGTTATCCGCGTGGACGAATTATTGAAGTCTACGGTCCAGAATCTTCTGGGAAAACCACTGTTGCCCTA
CATGCTGTTGCCGAGGTTCAAAAACAAGGTGGAATTGCTGCCTTTATTGATGCTGAGAACGCCTTAGACCCTGAATACGC
TAGAGCTTTGGGGGTTGACATTGATGAGCTATTACTCTCCCAACCGGATACTGGTGAACAAGGGTTAGAAATTGCTGATG
CCTTAGTGTCCTCTGGTGCGATTGATATTGTCGTTGTCGATTCTGTTGCTGCCTTAGTTCCACGGGCTGAAATTGAAGGT
GAGATGGGGGACTCCCATGTGGGGCTCCAAGCTCGCTTGATGTCTCAAGCCCTACGGAAGTTATCGGGCTCCATTAATAA
GACGAAAACCATTGCCATGTTTATTAACCAGATTCGTGAAAAAGTAGGTGTCATGTTTGGGAACCCAGAAACCACCCCAG
GGGGAAGGGCCCTAAAATTTTATTCCACTATTCGTCTAGAAGTTAGACGCGGGGAACGGATCAAATCCGGTCAGGATATT
ATTGGTAACCGCACTAAGATTAAAGTTGTAAAAAATAAGGTAGCTCCGCCATTTAAGGTTGCTGAAGTGGATATTATGTA
TGGGCAAGGAATTTCTCAAGCGGGTGAATTAGTTGATTTAGCTGCTGACATGGATATCATTAAGAAGAGTGGCTCTTGGT
ATTCTTACGGGGATGACCGGATTGGCCAAGGACGCGAGAATGCCAAACTATATCTCACCGAAAACCCTGACATATTTAAG
GAAATTGATAGTAAGGTTCGAGCAGAGTATGGTTTTGGTCCAGCTGTTGAAGATGACGATTCAGAGGATGAAACCACCAA
TGAAGAAGCCAAAAACGATTCATCAAGTGATGAAGAAAATGAAACCCTAGATTTATTTAACGATGATGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.