Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | V1567_RS20815 | Genome accession | NZ_CP143741 |
| Coordinates | 4347176..4348234 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei subsp. hoffmannii strain ECC-080 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4314946..4348234 | 4347176..4348234 | within | 0 |
Gene organization within MGE regions
Location: 4314946..4348234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1567_RS20635 (V1567_20620) | - | 4314946..4316526 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| V1567_RS20640 (V1567_20625) | - | 4316538..4317953 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| V1567_RS20645 (V1567_20630) | fdrA | 4317953..4319494 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| V1567_RS20650 (V1567_20635) | - | 4319603..4320208 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| V1567_RS20655 (V1567_20640) | - | 4320529..4321458 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| V1567_RS20660 (V1567_20645) | - | 4321455..4321613 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| V1567_RS20665 (V1567_20650) | - | 4321793..4322311 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| V1567_RS20670 (V1567_20655) | - | 4322394..4322573 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| V1567_RS20675 (V1567_20660) | stpA | 4322611..4323015 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| V1567_RS20680 (V1567_20665) | alaE | 4323513..4323962 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| V1567_RS20685 (V1567_20670) | - | 4323995..4324339 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| V1567_RS20690 (V1567_20675) | - | 4324498..4324824 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| V1567_RS20695 (V1567_20680) | nrdH | 4325068..4325307 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| V1567_RS20700 (V1567_20685) | nrdI | 4325304..4325714 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| V1567_RS20705 (V1567_20690) | nrdE | 4325687..4327831 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| V1567_RS20710 (V1567_20695) | nrdF | 4327841..4328800 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| V1567_RS20715 (V1567_20700) | proV | 4329134..4330336 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| V1567_RS20720 (V1567_20705) | proW | 4330329..4331393 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| V1567_RS20725 (V1567_20710) | proX | 4331403..4332398 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| V1567_RS20730 (V1567_20715) | - | 4332608..4333792 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| V1567_RS20735 (V1567_20720) | emrR | 4334107..4334637 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| V1567_RS20740 (V1567_20725) | emrA | 4334766..4335938 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| V1567_RS20745 (V1567_20730) | emrB | 4335955..4337502 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| V1567_RS20750 (V1567_20735) | - | 4337587..4338693 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| V1567_RS20755 (V1567_20740) | - | 4339004..4339147 (+) | 144 | Protein_4048 | hypothetical protein | - |
| V1567_RS20760 (V1567_20745) | luxS | 4339209..4339724 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| V1567_RS20765 (V1567_20750) | gshA | 4339877..4341421 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| V1567_RS20770 (V1567_20755) | - | 4341505..4341933 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| V1567_RS20775 (V1567_20760) | yqaB | 4341930..4342496 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| V1567_RS20800 (V1567_20785) | csrA | 4343421..4343606 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| V1567_RS20805 (V1567_20790) | alaS | 4343848..4346475 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| V1567_RS20810 (V1567_20795) | recX | 4346607..4347107 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| V1567_RS20815 (V1567_20800) | recA | 4347176..4348234 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=931117 V1567_RS20815 WP_022649140.1 4347176..4348234(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain ECC-080]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=931117 V1567_RS20815 WP_022649140.1 4347176..4348234(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain ECC-080]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.