Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | V1568_RS20825 | Genome accession | NZ_CP143729 |
| Coordinates | 4348383..4349441 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei subsp. hoffmannii strain ECC-102 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4316012..4349441 | 4348383..4349441 | within | 0 |
Gene organization within MGE regions
Location: 4316012..4349441
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1568_RS20640 (V1568_20625) | - | 4316012..4317592 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| V1568_RS20645 (V1568_20630) | - | 4317604..4319019 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| V1568_RS20650 (V1568_20635) | fdrA | 4319019..4320560 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| V1568_RS20655 (V1568_20640) | - | 4320669..4321274 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| V1568_RS20660 (V1568_20645) | - | 4321595..4322524 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| V1568_RS20665 (V1568_20650) | - | 4322521..4322679 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| V1568_RS20670 (V1568_20655) | - | 4322859..4323377 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| V1568_RS20675 (V1568_20660) | - | 4323460..4323639 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| V1568_RS20680 (V1568_20665) | stpA | 4323677..4324081 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| V1568_RS20685 (V1568_20670) | alaE | 4324579..4325028 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| V1568_RS20690 (V1568_20675) | - | 4325061..4325405 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| V1568_RS20695 (V1568_20680) | - | 4325564..4325890 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| V1568_RS20700 (V1568_20685) | nrdH | 4326134..4326373 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| V1568_RS20705 (V1568_20690) | nrdI | 4326370..4326780 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| V1568_RS20710 (V1568_20695) | nrdE | 4326753..4328897 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| V1568_RS20715 (V1568_20700) | nrdF | 4328907..4329866 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| V1568_RS20720 (V1568_20705) | proV | 4330200..4331402 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| V1568_RS20725 (V1568_20710) | proW | 4331395..4332459 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| V1568_RS20730 (V1568_20715) | proX | 4332469..4333464 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| V1568_RS20735 (V1568_20720) | - | 4333674..4334858 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| V1568_RS20740 (V1568_20725) | emrR | 4335173..4335703 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| V1568_RS20745 (V1568_20730) | emrA | 4335832..4337004 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| V1568_RS20750 (V1568_20735) | emrB | 4337021..4338568 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| V1568_RS20755 (V1568_20740) | - | 4338653..4339759 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| V1568_RS20760 (V1568_20745) | - | 4340070..4340213 (+) | 144 | Protein_4049 | hypothetical protein | - |
| V1568_RS20765 (V1568_20750) | luxS | 4340275..4340790 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| V1568_RS20770 (V1568_20755) | gshA | 4340943..4342487 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| V1568_RS20775 (V1568_20760) | - | 4342571..4342999 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| V1568_RS20780 (V1568_20765) | yqaB | 4342996..4343562 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| V1568_RS20810 (V1568_20795) | csrA | 4344628..4344813 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| V1568_RS20815 (V1568_20800) | alaS | 4345055..4347682 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| V1568_RS20820 (V1568_20805) | recX | 4347814..4348314 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| V1568_RS20825 (V1568_20810) | recA | 4348383..4349441 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=930984 V1568_RS20825 WP_022649140.1 4348383..4349441(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain ECC-102]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=930984 V1568_RS20825 WP_022649140.1 4348383..4349441(-) (recA) [Enterobacter hormaechei subsp. hoffmannii strain ECC-102]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.