Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | DBT38_RS03090 | Genome accession | NZ_CP142608 |
| Coordinates | 681865..682980 (+) | Length | 371 a.a. |
| NCBI ID | WP_013669682.1 | Uniprot ID | F2I5Q4 |
| Organism | Aerococcus tenax strain UMB0337 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 677315..699074 | 681865..682980 | within | 0 |
Gene organization within MGE regions
Location: 677315..699074
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBT38_RS03075 (DBT38_03075) | - | 677315..679669 (+) | 2355 | WP_111851695.1 | DNA translocase FtsK | - |
| DBT38_RS03080 (DBT38_03080) | pgsA | 679915..680493 (+) | 579 | WP_111851694.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| DBT38_RS03085 (DBT38_03085) | - | 680545..681783 (+) | 1239 | WP_111851693.1 | competence/damage-inducible protein A | - |
| DBT38_RS03090 (DBT38_03090) | recA | 681865..682980 (+) | 1116 | WP_013669682.1 | recombinase RecA | Machinery gene |
| DBT38_RS03095 (DBT38_03095) | rny | 683265..684836 (+) | 1572 | WP_064292335.1 | ribonuclease Y | - |
| DBT38_RS03100 (DBT38_03100) | - | 685491..686648 (-) | 1158 | WP_111851692.1 | site-specific integrase | - |
| DBT38_RS03105 (DBT38_03105) | - | 686763..687230 (-) | 468 | WP_111851691.1 | helix-turn-helix transcriptional regulator | - |
| DBT38_RS03110 (DBT38_03110) | - | 687368..687574 (+) | 207 | WP_111851690.1 | transcriptional regulator | - |
| DBT38_RS03115 (DBT38_03115) | - | 688086..688712 (+) | 627 | WP_111851689.1 | Rha family transcriptional regulator | - |
| DBT38_RS03120 (DBT38_03120) | - | 688726..688875 (+) | 150 | WP_181573607.1 | hypothetical protein | - |
| DBT38_RS03125 (DBT38_03125) | - | 688906..689250 (+) | 345 | WP_111851688.1 | hypothetical protein | - |
| DBT38_RS03130 (DBT38_03130) | - | 689418..690077 (+) | 660 | WP_111851687.1 | Fic family protein | - |
| DBT38_RS03135 (DBT38_03135) | - | 690193..690597 (+) | 405 | WP_111851686.1 | hypothetical protein | - |
| DBT38_RS03140 (DBT38_03140) | - | 690610..690894 (+) | 285 | WP_060778030.1 | helix-turn-helix domain-containing protein | - |
| DBT38_RS03145 (DBT38_03145) | - | 691050..691535 (+) | 486 | WP_111851685.1 | hypothetical protein | - |
| DBT38_RS03150 (DBT38_03150) | - | 691545..692483 (+) | 939 | WP_111851684.1 | primase alpha helix C-terminal domain-containing protein | - |
| DBT38_RS03155 (DBT38_03155) | - | 692476..693954 (+) | 1479 | WP_111851683.1 | DNA primase family protein | - |
| DBT38_RS03160 (DBT38_03160) | - | 694272..694520 (+) | 249 | WP_111851682.1 | hypothetical protein | - |
| DBT38_RS03165 (DBT38_03165) | - | 694532..694774 (+) | 243 | WP_111851681.1 | hypothetical protein | - |
| DBT38_RS03170 (DBT38_03170) | - | 694788..695060 (+) | 273 | WP_111851680.1 | hypothetical protein | - |
| DBT38_RS03175 (DBT38_03175) | - | 695047..695316 (+) | 270 | WP_111851679.1 | hypothetical protein | - |
| DBT38_RS03180 (DBT38_03180) | - | 695475..695909 (+) | 435 | WP_111851678.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| DBT38_RS03185 (DBT38_03185) | - | 695933..696298 (+) | 366 | WP_111851677.1 | hypothetical protein | - |
| DBT38_RS03190 (DBT38_03190) | - | 696327..696938 (+) | 612 | WP_111851676.1 | hypothetical protein | - |
| DBT38_RS03195 (DBT38_03195) | - | 696969..697451 (+) | 483 | WP_111851675.1 | hypothetical protein | - |
| DBT38_RS03200 (DBT38_03200) | - | 698340..698507 (+) | 168 | WP_181566035.1 | hypothetical protein | - |
| DBT38_RS03205 (DBT38_03205) | - | 698540..698701 (+) | 162 | WP_181566034.1 | hypothetical protein | - |
| DBT38_RS03210 (DBT38_03210) | - | 698727..698909 (+) | 183 | Protein_628 | hypothetical protein | - |
| DBT38_RS03215 (DBT38_03215) | - | 698901..699074 (+) | 174 | WP_181566054.1 | histidine kinase | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 40078.80 Da Isoelectric Point: 4.3539
>NTDB_id=926285 DBT38_RS03090 WP_013669682.1 681865..682980(+) (recA) [Aerococcus tenax strain UMB0337]
MSTSHDANRQKALDQALKQIEKNFGKGAIMKMGESTDTQVSTVPSGSLSLDIALGVGGYPRGRIIEVYGPESSGKTTVAL
HAVAEVQKQGGIAAFIDAENALDPEYARALGVDIDELLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIEG
EMGDSHVGLQARLMSQALRKLSGSINKTKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRGERIKSGQDI
IGNRTKIKVVKNKVAPPFKVAEVDIMYGQGISQAGELVDLAADMDIIKKSGSWYSYGDDRIGQGRENAKLYLTENPDIFK
EIDSKVRAEYGFGPAVEDDDSEDETTNEEAKNDSSSDEENETLDLFNDDEE
MSTSHDANRQKALDQALKQIEKNFGKGAIMKMGESTDTQVSTVPSGSLSLDIALGVGGYPRGRIIEVYGPESSGKTTVAL
HAVAEVQKQGGIAAFIDAENALDPEYARALGVDIDELLLSQPDTGEQGLEIADALVSSGAIDIVVVDSVAALVPRAEIEG
EMGDSHVGLQARLMSQALRKLSGSINKTKTIAMFINQIREKVGVMFGNPETTPGGRALKFYSTIRLEVRRGERIKSGQDI
IGNRTKIKVVKNKVAPPFKVAEVDIMYGQGISQAGELVDLAADMDIIKKSGSWYSYGDDRIGQGRENAKLYLTENPDIFK
EIDSKVRAEYGFGPAVEDDDSEDETTNEEAKNDSSSDEENETLDLFNDDEE
Nucleotide
Download Length: 1116 bp
>NTDB_id=926285 DBT38_RS03090 WP_013669682.1 681865..682980(+) (recA) [Aerococcus tenax strain UMB0337]
ATGAGTACATCACATGATGCAAACCGCCAAAAGGCTTTAGACCAGGCCCTTAAACAAATTGAAAAAAACTTTGGTAAGGG
AGCTATAATGAAGATGGGAGAATCAACGGATACTCAGGTGTCGACTGTTCCGTCAGGCTCCTTATCCTTAGATATTGCCC
TAGGAGTCGGAGGTTATCCGCGTGGACGAATTATTGAAGTCTACGGTCCAGAATCTTCTGGGAAAACCACTGTTGCCCTA
CATGCTGTTGCCGAGGTTCAAAAACAAGGTGGAATTGCTGCCTTTATTGATGCTGAGAACGCCTTAGACCCTGAATACGC
TAGAGCTTTGGGGGTTGACATTGATGAGCTATTACTCTCCCAACCGGATACTGGTGAACAAGGGTTAGAAATTGCTGATG
CCTTAGTGTCCTCTGGTGCGATTGATATTGTCGTTGTCGATTCTGTTGCTGCCTTAGTTCCACGGGCTGAAATTGAAGGT
GAGATGGGGGACTCCCATGTGGGGCTCCAAGCTCGCTTGATGTCTCAAGCCCTACGGAAGTTATCGGGCTCCATTAATAA
GACGAAAACCATTGCCATGTTTATTAACCAGATTCGTGAAAAAGTAGGTGTCATGTTTGGGAACCCAGAAACCACCCCAG
GGGGAAGGGCCCTAAAATTTTATTCCACTATTCGTCTAGAAGTTAGACGCGGGGAACGGATCAAATCCGGTCAGGATATT
ATTGGTAACCGCACTAAGATTAAAGTTGTAAAAAATAAGGTAGCTCCGCCATTTAAGGTTGCTGAAGTGGATATTATGTA
TGGGCAAGGAATTTCTCAAGCGGGTGAATTAGTTGATTTAGCTGCTGACATGGATATCATTAAGAAGAGTGGCTCTTGGT
ATTCTTACGGGGATGACCGGATTGGCCAAGGACGCGAGAATGCCAAACTATATCTCACCGAAAACCCTGACATATTTAAG
GAAATTGATAGTAAGGTTCGAGCAGAGTATGGTTTTGGTCCAGCTGTTGAAGATGACGATTCAGAGGATGAAACCACCAA
TGAAGAAGCCAAAAACGATTCATCAAGTGATGAAGAAAATGAAACCCTAGATTTATTTAACGATGATGAAGAATAA
ATGAGTACATCACATGATGCAAACCGCCAAAAGGCTTTAGACCAGGCCCTTAAACAAATTGAAAAAAACTTTGGTAAGGG
AGCTATAATGAAGATGGGAGAATCAACGGATACTCAGGTGTCGACTGTTCCGTCAGGCTCCTTATCCTTAGATATTGCCC
TAGGAGTCGGAGGTTATCCGCGTGGACGAATTATTGAAGTCTACGGTCCAGAATCTTCTGGGAAAACCACTGTTGCCCTA
CATGCTGTTGCCGAGGTTCAAAAACAAGGTGGAATTGCTGCCTTTATTGATGCTGAGAACGCCTTAGACCCTGAATACGC
TAGAGCTTTGGGGGTTGACATTGATGAGCTATTACTCTCCCAACCGGATACTGGTGAACAAGGGTTAGAAATTGCTGATG
CCTTAGTGTCCTCTGGTGCGATTGATATTGTCGTTGTCGATTCTGTTGCTGCCTTAGTTCCACGGGCTGAAATTGAAGGT
GAGATGGGGGACTCCCATGTGGGGCTCCAAGCTCGCTTGATGTCTCAAGCCCTACGGAAGTTATCGGGCTCCATTAATAA
GACGAAAACCATTGCCATGTTTATTAACCAGATTCGTGAAAAAGTAGGTGTCATGTTTGGGAACCCAGAAACCACCCCAG
GGGGAAGGGCCCTAAAATTTTATTCCACTATTCGTCTAGAAGTTAGACGCGGGGAACGGATCAAATCCGGTCAGGATATT
ATTGGTAACCGCACTAAGATTAAAGTTGTAAAAAATAAGGTAGCTCCGCCATTTAAGGTTGCTGAAGTGGATATTATGTA
TGGGCAAGGAATTTCTCAAGCGGGTGAATTAGTTGATTTAGCTGCTGACATGGATATCATTAAGAAGAGTGGCTCTTGGT
ATTCTTACGGGGATGACCGGATTGGCCAAGGACGCGAGAATGCCAAACTATATCTCACCGAAAACCCTGACATATTTAAG
GAAATTGATAGTAAGGTTCGAGCAGAGTATGGTTTTGGTCCAGCTGTTGAAGATGACGATTCAGAGGATGAAACCACCAA
TGAAGAAGCCAAAAACGATTCATCAAGTGATGAAGAAAATGAAACCCTAGATTTATTTAACGATGATGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.