Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | R6I09_RS08430 | Genome accession | NZ_CP137701 |
| Coordinates | 1820229..1821296 (+) | Length | 355 a.a. |
| NCBI ID | WP_003252365.1 | Uniprot ID | I7B6K4 |
| Organism | Pseudomonas putida isolate FELIX_MS683 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1815229..1826296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R6I09_RS08410 (R6I09_08410) | fdxA | 1815298..1815621 (-) | 324 | WP_003252355.1 | ferredoxin FdxA | - |
| R6I09_RS08415 (R6I09_08415) | mutS | 1815762..1818335 (-) | 2574 | WP_010952693.1 | DNA mismatch repair protein MutS | - |
| R6I09_RS08420 (R6I09_08420) | - | 1818520..1819587 (+) | 1068 | WP_049588159.1 | hypothetical protein | - |
| R6I09_RS08425 (R6I09_08425) | - | 1819643..1820125 (+) | 483 | WP_010952695.1 | CinA family protein | - |
| R6I09_RS08430 (R6I09_08430) | recA | 1820229..1821296 (+) | 1068 | WP_003252365.1 | recombinase RecA | Machinery gene |
| R6I09_RS08435 (R6I09_08435) | recX | 1821318..1821788 (+) | 471 | WP_010952696.1 | recombination regulator RecX | - |
| R6I09_RS08440 (R6I09_08440) | - | 1822065..1823183 (-) | 1119 | WP_010952697.1 | LOG family protein | - |
| R6I09_RS08445 (R6I09_08445) | - | 1823344..1823553 (+) | 210 | WP_020193312.1 | hypothetical protein | - |
| R6I09_RS08450 (R6I09_08450) | - | 1823568..1823987 (-) | 420 | WP_003252372.1 | quorum-sensing-regulated virulence factor family protein | - |
| R6I09_RS08455 (R6I09_08455) | - | 1824204..1824914 (+) | 711 | WP_003252373.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| R6I09_RS08460 (R6I09_08460) | erdR | 1825094..1825744 (+) | 651 | WP_010952699.1 | response regulator transcription factor ErdR | - |
| R6I09_RS08465 (R6I09_08465) | - | 1825818..1826183 (+) | 366 | WP_010952700.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 37544.89 Da Isoelectric Point: 5.3228
>NTDB_id=899972 R6I09_RS08430 WP_003252365.1 1820229..1821296(+) (recA) [Pseudomonas putida isolate FELIX_MS683]
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
Nucleotide
Download Length: 1068 bp
>NTDB_id=899972 R6I09_RS08430 WP_003252365.1 1820229..1821296(+) (recA) [Pseudomonas putida isolate FELIX_MS683]
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
Similar proteins
Only experimentally validated proteins are listed.