Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | RX579_RS08430 | Genome accession | NZ_CP136395 |
| Coordinates | 1820228..1821295 (+) | Length | 355 a.a. |
| NCBI ID | WP_003252365.1 | Uniprot ID | I7B6K4 |
| Organism | Pseudomonas putida strain mt-2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1815228..1826295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RX579_RS08410 (RX579_08410) | fdxA | 1815297..1815620 (-) | 324 | WP_003252355.1 | ferredoxin FdxA | - |
| RX579_RS08415 (RX579_08415) | mutS | 1815761..1818334 (-) | 2574 | WP_010952693.1 | DNA mismatch repair protein MutS | - |
| RX579_RS08420 (RX579_08420) | - | 1818519..1819586 (+) | 1068 | WP_049588159.1 | hypothetical protein | - |
| RX579_RS08425 (RX579_08425) | - | 1819642..1820124 (+) | 483 | WP_010952695.1 | CinA family protein | - |
| RX579_RS08430 (RX579_08430) | recA | 1820228..1821295 (+) | 1068 | WP_003252365.1 | recombinase RecA | Machinery gene |
| RX579_RS08435 (RX579_08435) | recX | 1821317..1821787 (+) | 471 | WP_010952696.1 | recombination regulator RecX | - |
| RX579_RS08440 (RX579_08440) | - | 1822064..1823182 (-) | 1119 | WP_010952697.1 | LOG family protein | - |
| RX579_RS08445 (RX579_08445) | - | 1823343..1823552 (+) | 210 | WP_020193312.1 | hypothetical protein | - |
| RX579_RS08450 (RX579_08450) | - | 1823567..1823986 (-) | 420 | WP_003252372.1 | quorum-sensing-regulated virulence factor family protein | - |
| RX579_RS08455 (RX579_08455) | - | 1824203..1824913 (+) | 711 | WP_003252373.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| RX579_RS08460 (RX579_08460) | erdR | 1825093..1825743 (+) | 651 | WP_010952699.1 | response regulator transcription factor ErdR | - |
| RX579_RS08465 (RX579_08465) | - | 1825817..1826182 (+) | 366 | WP_010952700.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 37544.89 Da Isoelectric Point: 5.3228
>NTDB_id=890510 RX579_RS08430 WP_003252365.1 1820228..1821295(+) (recA) [Pseudomonas putida strain mt-2]
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
Nucleotide
Download Length: 1068 bp
>NTDB_id=890510 RX579_RS08430 WP_003252365.1 1820228..1821295(+) (recA) [Pseudomonas putida strain mt-2]
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
Similar proteins
Only experimentally validated proteins are listed.