Detailed information NTG0088960

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU28_RS09455
• Genome accession: NZ_AP024871
• Coordinates: 2039516..2040544 (-)
• Length: 342 a.a.
• NCBI ID: WP_261815952.1
• Uniprot ID: -
• Organism: Vibrio gallicus strain CIP 107863
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2034516..2045544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU28_RS09440	-	2034733..2035905 (-)	1173	WP_261815949.1	aspartate kinase	-
OCU28_RS09445	alaS	2036055..2038646 (-)	2592	WP_261815950.1	alanine--tRNA ligase	-
OCU28_RS09450	recX	2038952..2039437 (-)	486	WP_261815951.1	recombination regulator RecX	-
OCU28_RS09455	recA	2039516..2040544 (-)	1029	WP_261815952.1	recombinase RecA	Machinery gene
OCU28_RS09460	-	2040659..2041144 (-)	486	WP_261815953.1	CinA family protein	-
OCU28_RS09465	-	2041402..2042316 (+)	915	WP_261815954.1	dienelactone hydrolase family protein	-
OCU28_RS09470	mutS	2042641..2045232 (+)	2592	WP_261815955.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 36726.12 Da
• Isoelectric Point: 5.1763

>NTDB_id=88960 OCU28_RS09455 WP_261815952.1 2039516..2040544(-) (recA) [Vibrio gallicus strain CIP 107863]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNKTMDVETISTGSLSLDVALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFVDAEHALDPIYAQKLGVDIEQLLVSQPDTGEQALEICDALARSGAVDVLVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEIVGNE
TRIKVVKNKIAAPFKQAETQIMYGKGFNREGELIDLGVKNKLIEKAGAWYSYNGDKIGQGKANAGKFLRENPETAKTIDS
KLREMLLATAPQVEEAPAAETE

Nucleotide

• Length: 1029 bp

>NTDB_id=88960 OCU28_RS09455 WP_261815952.1 2039516..2040544(-) (recA) [Vibrio gallicus strain CIP 107863]
ATGGACGAAAATAAACAAAAAGCACTGGCGGCAGCGCTAGGTCAGATCGAAAAGCAGTTCGGTAAAGGCTCAATTATGCG
CCTTGGTGACAACAAAACCATGGATGTTGAAACCATTTCGACCGGCTCACTTTCTCTTGATGTTGCTCTAGGCGCCGGTG
GTTTGCCTATGGGGCGTATCGTCGAGGTATATGGCCCTGAGTCTTCAGGTAAGACGACATTAACTCTTGAGTTAATTGCT
GCGGCACAACGTGAAGGCAAAACCTGTGCTTTTGTTGATGCTGAACATGCACTTGATCCTATATATGCTCAAAAACTTGG
CGTTGATATTGAACAGCTACTTGTTTCCCAACCAGATACTGGTGAACAAGCTCTTGAGATCTGTGATGCGTTGGCTCGCT
CTGGCGCGGTTGATGTCCTTGTAGTGGATTCAGTTGCGGCCTTGACTCCAAAGGCTGAAATTGAAGGTGAGATGGGTGAC
AGCCACATGGGTCTGCAAGCTCGTATGCTTTCTCAAGCAATGCGTAAGCTAACCGGTAACCTAAAACAGTCAAACTGTAT
GTGTATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAACCCAGAAACAACTACTGGCGGTAACGCAC
TCAAATTTTATGCCTCAGTTCGTCTAGATATTCGCCGTACCGGTGCTATCAAAGATGGTGATGAAATTGTCGGTAACGAA
ACACGCATTAAAGTCGTTAAGAACAAGATTGCAGCACCGTTTAAACAAGCTGAAACCCAAATCATGTATGGTAAAGGCTT
TAACCGCGAGGGTGAGCTTATCGACCTTGGGGTGAAGAATAAGCTAATTGAAAAAGCAGGCGCTTGGTACAGCTACAATG
GAGATAAGATTGGTCAAGGTAAGGCTAATGCAGGTAAATTCTTACGAGAAAACCCTGAAACAGCTAAGACAATTGACAGC
AAGCTGAGAGAGATGCTGCTAGCTACTGCTCCTCAGGTTGAAGAAGCTCCAGCAGCCGAGACAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	91.437	95.614	0.874
recA	Vibrio cholerae strain A1552	91.437	95.614	0.874
recA	Pseudomonas stutzeri DSM 10701	73.235	99.415	0.728
recA	Acinetobacter baylyi ADP1	70.76	100	0.708
recA	Acinetobacter baumannii D1279779	71.386	99.123	0.708
recA	Glaesserella parasuis strain SC1401	69.027	99.123	0.684
recA	Neisseria gonorrhoeae MS11	69.325	95.322	0.661
recA	Neisseria gonorrhoeae MS11	69.325	95.322	0.661
recA	Neisseria gonorrhoeae strain FA1090	69.325	95.322	0.661
recA	Ralstonia pseudosolanacearum GMI1000	70.701	91.813	0.649
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	93.86	0.594
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	93.275	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.06	97.368	0.585
recA	Helicobacter pylori strain NCTC11637	60.856	95.614	0.582
recA	Streptococcus pneumoniae D39	61.3	94.444	0.579
recA	Streptococcus pneumoniae TIGR4	61.3	94.444	0.579
recA	Streptococcus pneumoniae Rx1	61.3	94.444	0.579
recA	Streptococcus pneumoniae R6	61.3	94.444	0.579
recA	Helicobacter pylori 26695	60.55	95.614	0.579
recA	Streptococcus mitis NCTC 12261	60.991	94.444	0.576
recA	Streptococcus mitis SK321	60.991	94.444	0.576
recA	Latilactobacillus sakei subsp. sakei 23K	57.771	99.708	0.576
recA	Streptococcus mutans UA159	60.615	95.029	0.576
recA	Streptococcus pyogenes NZ131	60.308	95.029	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.125	93.86	0.564
recA	Lactococcus lactis subsp. cremoris KW2	58.514	94.444	0.553