Detailed information NTG0088804

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: OCU77_RS02785
• Genome accession: NZ_AP024852
• Coordinates: 565816..566865 (+)
• Length: 349 a.a.
• NCBI ID: WP_107303059.1
• Uniprot ID: A0A2T3NZD7
• Organism: Photobacterium swingsii strain CECT 7576
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 560816..571865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU77_RS02770	rpoS	561368..562360 (+)	993	WP_048900602.1	RNA polymerase sigma factor RpoS	-
OCU77_RS02775	mutS	562456..564993 (-)	2538	WP_372022870.1	DNA mismatch repair protein MutS	-
OCU77_RS02780	-	565211..565714 (+)	504	WP_048900604.1	CinA family protein	-
OCU77_RS02785	recA	565816..566865 (+)	1050	WP_107303059.1	recombinase RecA	Machinery gene
OCU77_RS02790	recX	566956..567444 (+)	489	WP_048900605.1	recombination regulator RecX	-
OCU77_RS02795	alaS	567659..570280 (+)	2622	WP_048900606.1	alanine--tRNA ligase	-
OCU77_RS02800	-	570296..571474 (+)	1179	WP_048900607.1	aspartate kinase	-
OCU77_RS02805	csrA	571558..571755 (+)	198	WP_048900608.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37417.87 Da
• Isoelectric Point: 4.8682

>NTDB_id=88804 OCU77_RS02785 WP_107303059.1 565816..566865(+) (recA) [Photobacterium swingsii strain CECT 7576]
MDDNKQKALAAALGQIEKQFGKGSIMKLGDNRTMDIETVSTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEAIA
CAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLVSQPDTGEQALEICDALARSGAVDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGQGFNRNGELIDLGVKHKLVEKAGAWYSYKGDKIGQGKANSCKYLVENPAIAAEIEK
SLRDMLLSKEPLAEDESVEDIDAAEGEAF

Nucleotide

• Length: 1050 bp

>NTDB_id=88804 OCU77_RS02785 WP_107303059.1 565816..566865(+) (recA) [Photobacterium swingsii strain CECT 7576]
ATGGACGACAACAAACAGAAGGCTCTTGCCGCAGCGTTAGGCCAGATTGAAAAGCAATTTGGTAAAGGTTCAATCATGAA
GTTGGGCGATAACCGCACAATGGATATTGAAACTGTTTCTACAGGCTCATTGTCACTGGATATCGCACTGGGTGCTGGTG
GCTTACCAATGGGACGTATTGTTGAAATTTATGGTCCTGAATCATCAGGTAAAACAACATTAACGCTTGAAGCGATTGCA
TGCGCACAAAAAGCCGGTAAGACCTGTGCTTTCATCGATGCAGAGCATGCACTTGATCCTATCTACGCACAAAAGCTAGG
TGTAGATATCGACCAACTTTTGGTTTCTCAACCAGATACCGGTGAGCAAGCACTAGAGATTTGTGATGCATTAGCACGTT
CTGGCGCCGTTGATTTGATCGTTGTCGATTCCGTTGCTGCCCTAACGCCAAAAGCTGAAATCGAAGGCGAAATGGGTGAC
TCTCACATGGGTCTGCAAGCACGTATGCTGTCACAAGCGATGCGTAAGTTAACGGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATTAACCAAATCCGTATGAAGATTGGTGTAATGTTTGGTAACCCTGAAACAACCACGGGTGGTAACGCAC
TGAAATTCTACGCTTCTGTACGTCTTGATATTCGCCGTACCGGTGCAATCAAAGATGGCGACGAAGTGGTGGGTAATGAA
ACCCGCATTAAAGTTGTGAAGAACAAAATTGCTGCACCATTTAAACAAGCTGAGACTCAAATCCTCTATGGCCAAGGCTT
TAACCGTAACGGTGAGCTGATTGACCTAGGTGTGAAGCACAAGCTGGTTGAAAAAGCAGGTGCATGGTACAGCTACAAAG
GCGATAAAATTGGCCAAGGTAAAGCGAACTCTTGTAAGTACCTTGTTGAAAACCCAGCAATTGCCGCTGAAATTGAAAAA
TCACTGCGCGATATGCTGCTAAGTAAAGAGCCACTGGCTGAAGACGAAAGCGTTGAAGATATCGATGCTGCAGAAGGCGA
AGCGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A2T3NZD7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	87.172	98.281	0.857
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.172	98.281	0.857
recA	Acinetobacter baylyi ADP1	73.563	99.713	0.734
recA	Pseudomonas stutzeri DSM 10701	73.487	99.427	0.731
recA	Acinetobacter baumannii D1279779	75.305	93.983	0.708
recA	Glaesserella parasuis strain SC1401	71.472	93.41	0.668
recA	Neisseria gonorrhoeae MS11	69.444	92.837	0.645
recA	Neisseria gonorrhoeae MS11	69.444	92.837	0.645
recA	Neisseria gonorrhoeae strain FA1090	69.444	92.837	0.645
recA	Ralstonia pseudosolanacearum GMI1000	72.026	89.112	0.642
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.526	93.696	0.605
recA	Helicobacter pylori strain NCTC11637	59.249	99.14	0.587
recA	Streptococcus mitis NCTC 12261	60.117	97.708	0.587
recA	Helicobacter pylori 26695	58.96	99.14	0.585
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	91.977	0.585
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.778	95.702	0.582
recA	Streptococcus pneumoniae TIGR4	62.539	92.55	0.579
recA	Streptococcus pneumoniae Rx1	62.539	92.55	0.579
recA	Streptococcus pneumoniae D39	62.539	92.55	0.579
recA	Streptococcus pneumoniae R6	62.539	92.55	0.579
recA	Latilactobacillus sakei subsp. sakei 23K	58.48	97.994	0.573
recA	Streptococcus mitis SK321	61.92	92.55	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.231	93.123	0.57
recA	Streptococcus mutans UA159	60.615	93.123	0.564
recA	Streptococcus pyogenes NZ131	60.615	93.123	0.564
recA	Lactococcus lactis subsp. cremoris KW2	58.514	92.55	0.542