Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | M9H32_RS07770 | Genome accession | NZ_CP134832 |
| Coordinates | 1613745..1614797 (-) | Length | 350 a.a. |
| NCBI ID | WP_002437037.1 | Uniprot ID | A0A4Q9WJI9 |
| Organism | Staphylococcus capitis strain ADQHB | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1612184..1675799 | 1613745..1614797 | within | 0 |
Gene organization within MGE regions
Location: 1612184..1675799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9H32_RS07770 (M9H32_07770) | recA | 1613745..1614797 (-) | 1053 | WP_002437037.1 | recombinase RecA | Machinery gene |
| M9H32_RS07775 (M9H32_07775) | - | 1614966..1616114 (-) | 1149 | WP_030064817.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| M9H32_RS07780 (M9H32_07780) | pgsA | 1616256..1616837 (-) | 582 | WP_002469863.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| M9H32_RS07785 (M9H32_07785) | - | 1616865..1617257 (-) | 393 | WP_030064815.1 | helix-turn-helix domain-containing protein | - |
| M9H32_RS07790 (M9H32_07790) | - | 1617276..1618103 (-) | 828 | WP_331245652.1 | YmfK family protein | - |
| M9H32_RS07795 (M9H32_07795) | ymfI | 1618261..1618968 (-) | 708 | WP_023350378.1 | elongation factor P 5-aminopentanone reductase | - |
| M9H32_RS07800 (M9H32_07800) | yfmH | 1618968..1620254 (-) | 1287 | WP_030064811.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| M9H32_RS07805 (M9H32_07805) | yfmF | 1620254..1621528 (-) | 1275 | WP_030064809.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| M9H32_RS07810 (M9H32_07810) | - | 1621570..1622280 (-) | 711 | WP_002436349.1 | GntR family transcriptional regulator | - |
| M9H32_RS12305 | - | 1622283..1623743 (-) | 1461 | Protein_1495 | DNA translocase FtsK | - |
| M9H32_RS12310 | - | 1623756..1624703 (-) | 948 | Protein_1496 | DNA translocase FtsK 4TM domain-containing protein | - |
| M9H32_RS07820 (M9H32_07820) | rnjB | 1624961..1626634 (-) | 1674 | WP_002469869.1 | ribonuclease J2 | - |
| M9H32_RS07825 (M9H32_07825) | pnp | 1626868..1628967 (-) | 2100 | WP_049428552.1 | polyribonucleotide nucleotidyltransferase | - |
| M9H32_RS07830 (M9H32_07830) | rpsO | 1629285..1629554 (-) | 270 | WP_002436359.1 | 30S ribosomal protein S15 | - |
| M9H32_RS07835 (M9H32_07835) | ribF | 1629676..1630647 (-) | 972 | WP_002436322.1 | riboflavin biosynthesis protein RibF | - |
| M9H32_RS07840 (M9H32_07840) | truB | 1630663..1631580 (-) | 918 | WP_002436304.1 | tRNA pseudouridine(55) synthase TruB | - |
| M9H32_RS07845 (M9H32_07845) | rbfA | 1631729..1632079 (-) | 351 | WP_331245653.1 | 30S ribosome-binding factor RbfA | - |
| M9H32_RS07850 (M9H32_07850) | infB | 1632236..1634401 (-) | 2166 | WP_049428549.1 | translation initiation factor IF-2 | - |
| M9H32_RS07855 (M9H32_07855) | - | 1634406..1634723 (-) | 318 | WP_002436350.1 | L7Ae/L30e/S12e/Gadd45 family ribosomal protein | - |
| M9H32_RS07860 (M9H32_07860) | rnpM | 1634720..1635004 (-) | 285 | WP_002436310.1 | RNase P modulator RnpM | - |
| M9H32_RS07865 (M9H32_07865) | nusA | 1635021..1636244 (-) | 1224 | WP_002436342.1 | transcription termination factor NusA | - |
| M9H32_RS07870 (M9H32_07870) | rimP | 1636265..1636732 (-) | 468 | WP_002436317.1 | ribosome maturation factor RimP | - |
| M9H32_RS07875 (M9H32_07875) | - | 1636958..1641268 (-) | 4311 | WP_095323917.1 | PolC-type DNA polymerase III | - |
| M9H32_RS07880 (M9H32_07880) | - | 1641524..1643227 (-) | 1704 | WP_049428545.1 | proline--tRNA ligase | - |
| M9H32_RS07885 (M9H32_07885) | rseP | 1643247..1644533 (-) | 1287 | WP_030064796.1 | RIP metalloprotease RseP | - |
| M9H32_RS07890 (M9H32_07890) | - | 1644773..1645555 (-) | 783 | WP_331245654.1 | phosphatidate cytidylyltransferase | - |
| M9H32_RS07895 (M9H32_07895) | - | 1645559..1646329 (-) | 771 | WP_002436351.1 | isoprenyl transferase | - |
| M9H32_RS07900 (M9H32_07900) | frr | 1646610..1647164 (-) | 555 | WP_002436295.1 | ribosome recycling factor | - |
| M9H32_RS07905 (M9H32_07905) | pyrH | 1647182..1647904 (-) | 723 | WP_002436299.1 | UMP kinase | - |
| M9H32_RS07910 (M9H32_07910) | tsf | 1648041..1648919 (-) | 879 | WP_030064793.1 | translation elongation factor Ts | - |
| M9H32_RS07915 (M9H32_07915) | rpsB | 1649070..1649858 (-) | 789 | WP_002436327.1 | 30S ribosomal protein S2 | - |
| M9H32_RS07920 (M9H32_07920) | codY | 1650111..1650884 (-) | 774 | WP_002436324.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| M9H32_RS07925 (M9H32_07925) | hslU | 1650907..1652310 (-) | 1404 | WP_002436320.1 | ATP-dependent protease ATPase subunit HslU | - |
| M9H32_RS07930 (M9H32_07930) | hslV | 1652394..1652936 (-) | 543 | WP_023350393.1 | ATP-dependent protease subunit HslV | - |
| M9H32_RS07935 (M9H32_07935) | xerC | 1652940..1653830 (-) | 891 | WP_023350394.1 | tyrosine recombinase XerC | - |
| M9H32_RS07940 (M9H32_07940) | trmFO | 1654067..1655374 (-) | 1308 | WP_030064791.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| M9H32_RS07945 (M9H32_07945) | topA | 1655395..1657470 (-) | 2076 | WP_030064789.1 | type I DNA topoisomerase | - |
| M9H32_RS07950 (M9H32_07950) | dprA | 1657648..1658519 (-) | 872 | Protein_1523 | DNA-processing protein DprA | - |
| M9H32_RS07955 (M9H32_07955) | sucD | 1658744..1659652 (-) | 909 | WP_002436344.1 | succinate--CoA ligase subunit alpha | - |
| M9H32_RS07960 (M9H32_07960) | sucC | 1659674..1660840 (-) | 1167 | WP_002436291.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| M9H32_RS07965 (M9H32_07965) | - | 1660948..1661718 (-) | 771 | WP_030064786.1 | ribonuclease HII | - |
| M9H32_RS07970 (M9H32_07970) | ylqF | 1661702..1662585 (-) | 884 | Protein_1527 | ribosome biogenesis GTPase YlqF | - |
| M9H32_RS07975 (M9H32_07975) | - | 1662865..1665465 (+) | 2601 | WP_064212244.1 | YfhO family protein | - |
| M9H32_RS07980 (M9H32_07980) | - | 1665458..1668070 (+) | 2613 | WP_030064780.1 | YfhO family protein | - |
| M9H32_RS07985 (M9H32_07985) | - | 1668522..1668749 (+) | 228 | WP_227947167.1 | hypothetical protein | - |
| M9H32_RS07990 (M9H32_07990) | - | 1668789..1669127 (+) | 339 | WP_049428535.1 | hypothetical protein | - |
| M9H32_RS07995 (M9H32_07995) | rplS | 1669704..1670054 (-) | 351 | WP_049428533.1 | 50S ribosomal protein L19 | - |
| M9H32_RS08000 (M9H32_08000) | trmD | 1670160..1670897 (-) | 738 | WP_030064770.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| M9H32_RS08005 (M9H32_08005) | rimM | 1670897..1671400 (-) | 504 | WP_030064768.1 | ribosome maturation factor RimM | - |
| M9H32_RS08010 (M9H32_08010) | rpsP | 1671663..1671938 (-) | 276 | WP_002453071.1 | 30S ribosomal protein S16 | - |
| M9H32_RS08015 (M9H32_08015) | ffh | 1672299..1673666 (-) | 1368 | WP_002435148.1 | signal recognition particle protein | - |
| M9H32_RS08020 (M9H32_08020) | - | 1673696..1674028 (-) | 333 | WP_002435170.1 | putative DNA-binding protein | - |
| M9H32_RS08025 (M9H32_08025) | ftsY | 1674015..1675274 (-) | 1260 | WP_030064764.1 | signal recognition particle-docking protein FtsY | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37971.88 Da Isoelectric Point: 4.9318
>NTDB_id=883976 M9H32_RS07770 WP_002437037.1 1613745..1614797(-) (recA) [Staphylococcus capitis strain ADQHB]
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRKVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKTYLKENPQIKEEIDR
KLREKLGIFDGDVEETDAEEEAPKTLFDEE
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRKVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKTYLKENPQIKEEIDR
KLREKLGIFDGDVEETDAEEEAPKTLFDEE
Nucleotide
Download Length: 1053 bp
>NTDB_id=883976 M9H32_RS07770 WP_002437037.1 1613745..1614797(-) (recA) [Staphylococcus capitis strain ADQHB]
TTGGATAACGAACGTCAAAAAGCTTTAGATACAGTTATAAAAAATATGGAGAAATCATTTGGTAAAGGTGCGGTTATGAA
ATTAGGCGACAATAAAGGTCGTAAAGTATCAAGCACATCAAGTGGTTCTGTAACAGTGGATAATGCCCTAGGTGTAGGTG
GTTATCCTAAAGGAAGAATTATAGAAATTTATGGACCTGAGAGTTCAGGTAAAACAACAGTTGCTTTACATGCAATTGCA
GAGGTTCAAAAAAACGGTGGAGTAGCTGCATTCATTGATGCTGAACACGCACTTGATCCTGTGTACGCTCAAGCTTTAGG
CGTAGATATTGACAACTTATACTTATCTCAACCTGATCATGGGGAACAGGGACTTGAAATTGCTGAAGCATTTGTTCGAA
GTGGTGCAGTTGATATTGTCGTGGTTGACTCAGTGGCAGCATTAACTCCTAAAGCTGAAATCGAAGGTGAAATGGGAGAT
ACACATGTCGGTTTACAAGCAAGATTAATGTCTCAAGCTTTAAGAAAATTATCTGGTGCAATTTCTAAATCAAACACAAC
TGCAATCTTTATTAACCAAATTCGTGAAAAAGTTGGTGTGATGTTTGGTAACCCAGAAACTACACCAGGTGGACGTGCAT
TAAAATTCTATAGTTCTGTAAGATTAGAAGTAAGAAGAGCTGAACAATTAAAACAAGGCCAAGATATCGTAGGTAACAGA
ACTAAAATCAAAGTTGTTAAAAATAAAGTAGCACCTCCATTCAGAGTAGCTGAAGTAGATATTATGTACGGTCAAGGTAT
TTCTAAAGAAGGCGAATTAATTGACTTAGGTGTTGAAAACGACATCGTTGATAAATCTGGTGCTTGGTACTCTTATAATG
GTGATCGAATGGGTCAAGGTAAAGAAAACGTTAAAACGTATTTAAAAGAAAACCCTCAAATTAAAGAAGAAATTGATCGT
AAATTACGAGAAAAATTAGGTATATTCGATGGAGACGTTGAAGAAACAGACGCTGAAGAAGAAGCACCTAAAACTTTATT
TGATGAAGAATAA
TTGGATAACGAACGTCAAAAAGCTTTAGATACAGTTATAAAAAATATGGAGAAATCATTTGGTAAAGGTGCGGTTATGAA
ATTAGGCGACAATAAAGGTCGTAAAGTATCAAGCACATCAAGTGGTTCTGTAACAGTGGATAATGCCCTAGGTGTAGGTG
GTTATCCTAAAGGAAGAATTATAGAAATTTATGGACCTGAGAGTTCAGGTAAAACAACAGTTGCTTTACATGCAATTGCA
GAGGTTCAAAAAAACGGTGGAGTAGCTGCATTCATTGATGCTGAACACGCACTTGATCCTGTGTACGCTCAAGCTTTAGG
CGTAGATATTGACAACTTATACTTATCTCAACCTGATCATGGGGAACAGGGACTTGAAATTGCTGAAGCATTTGTTCGAA
GTGGTGCAGTTGATATTGTCGTGGTTGACTCAGTGGCAGCATTAACTCCTAAAGCTGAAATCGAAGGTGAAATGGGAGAT
ACACATGTCGGTTTACAAGCAAGATTAATGTCTCAAGCTTTAAGAAAATTATCTGGTGCAATTTCTAAATCAAACACAAC
TGCAATCTTTATTAACCAAATTCGTGAAAAAGTTGGTGTGATGTTTGGTAACCCAGAAACTACACCAGGTGGACGTGCAT
TAAAATTCTATAGTTCTGTAAGATTAGAAGTAAGAAGAGCTGAACAATTAAAACAAGGCCAAGATATCGTAGGTAACAGA
ACTAAAATCAAAGTTGTTAAAAATAAAGTAGCACCTCCATTCAGAGTAGCTGAAGTAGATATTATGTACGGTCAAGGTAT
TTCTAAAGAAGGCGAATTAATTGACTTAGGTGTTGAAAACGACATCGTTGATAAATCTGGTGCTTGGTACTCTTATAATG
GTGATCGAATGGGTCAAGGTAAAGAAAACGTTAAAACGTATTTAAAAGAAAACCCTCAAATTAAAGAAGAAATTGATCGT
AAATTACGAGAAAAATTAGGTATATTCGATGGAGACGTTGAAGAAACAGACGCTGAAGAAGAAGCACCTAAAACTTTATT
TGATGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.