Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PszF2a_RS07135 | Genome accession | NZ_AP024722 |
| Coordinates | 1459794..1460840 (+) | Length | 348 a.a. |
| NCBI ID | WP_014596281.1 | Uniprot ID | A0A137YBS7 |
| Organism | Stutzerimonas stutzeri strain F2a | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1414368..1461313 | 1459794..1460840 | within | 0 |
Gene organization within MGE regions
Location: 1414368..1461313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PszF2a_RS06885 (PszF2a_13480) | mutS | 1414368..1416947 (-) | 2580 | WP_256445405.1 | DNA mismatch repair protein MutS | - |
| PszF2a_RS06890 (PszF2a_13490) | - | 1416998..1418239 (-) | 1242 | WP_221293126.1 | site-specific integrase | - |
| PszF2a_RS06895 (PszF2a_13500) | - | 1418206..1418403 (-) | 198 | WP_221293127.1 | excisionase | - |
| PszF2a_RS06900 | - | 1418574..1418822 (+) | 249 | WP_221293128.1 | hypothetical protein | - |
| PszF2a_RS06905 (PszF2a_13520) | - | 1419383..1419607 (-) | 225 | WP_221293129.1 | hypothetical protein | - |
| PszF2a_RS06910 (PszF2a_13530) | - | 1419618..1420379 (-) | 762 | WP_221293130.1 | hypothetical protein | - |
| PszF2a_RS06915 (PszF2a_13540) | - | 1420426..1420755 (-) | 330 | WP_221293131.1 | pyocin activator PrtN family protein | - |
| PszF2a_RS06920 (PszF2a_13550) | - | 1420752..1421219 (-) | 468 | WP_106442186.1 | hypothetical protein | - |
| PszF2a_RS06925 | - | 1421200..1421415 (-) | 216 | WP_162557887.1 | hypothetical protein | - |
| PszF2a_RS06930 (PszF2a_13560) | - | 1421405..1421695 (-) | 291 | WP_106442185.1 | phage antirepressor KilAC domain-containing protein | - |
| PszF2a_RS06935 (PszF2a_13570) | - | 1421708..1422265 (-) | 558 | WP_221293132.1 | hypothetical protein | - |
| PszF2a_RS06940 (PszF2a_13590) | - | 1422514..1423263 (-) | 750 | WP_106442183.1 | XRE family transcriptional regulator | - |
| PszF2a_RS06945 (PszF2a_13600) | - | 1423367..1423666 (+) | 300 | WP_106443539.1 | helix-turn-helix transcriptional regulator | - |
| PszF2a_RS06950 (PszF2a_13610) | - | 1424003..1424515 (+) | 513 | WP_106442182.1 | phage regulatory CII family protein | - |
| PszF2a_RS06955 | - | 1424508..1424717 (+) | 210 | WP_221293133.1 | TraR/DksA C4-type zinc finger protein | - |
| PszF2a_RS06960 (PszF2a_13620) | - | 1424735..1426957 (+) | 2223 | WP_221293413.1 | VapE domain-containing protein | - |
| PszF2a_RS06965 (PszF2a_13630) | - | 1426954..1427316 (+) | 363 | WP_245002920.1 | hypothetical protein | - |
| PszF2a_RS06970 (PszF2a_13640) | - | 1427853..1428230 (+) | 378 | WP_221293134.1 | hypothetical protein | - |
| PszF2a_RS06975 (PszF2a_13650) | - | 1428223..1428609 (+) | 387 | WP_221293135.1 | HNH endonuclease | - |
| PszF2a_RS06980 (PszF2a_13660) | - | 1428642..1429232 (+) | 591 | WP_221293136.1 | phage terminase small subunit P27 family | - |
| PszF2a_RS06985 (PszF2a_13670) | - | 1429195..1431009 (+) | 1815 | WP_221293137.1 | terminase large subunit | - |
| PszF2a_RS06990 (PszF2a_13680) | - | 1431006..1431185 (+) | 180 | WP_221293138.1 | hypothetical protein | - |
| PszF2a_RS06995 (PszF2a_13690) | - | 1431188..1432471 (+) | 1284 | WP_221293139.1 | phage portal protein | - |
| PszF2a_RS07000 | - | 1432794..1433258 (+) | 465 | WP_221293140.1 | Panacea domain-containing protein | - |
| PszF2a_RS07005 (PszF2a_13700) | - | 1433810..1434772 (+) | 963 | WP_221293141.1 | S49 family peptidase | - |
| PszF2a_RS07010 (PszF2a_13710) | - | 1434836..1436152 (+) | 1317 | WP_221293142.1 | phage major capsid protein | - |
| PszF2a_RS07015 (PszF2a_13720) | - | 1436210..1436530 (+) | 321 | WP_221293143.1 | hypothetical protein | - |
| PszF2a_RS07020 (PszF2a_13730) | - | 1436530..1437090 (+) | 561 | WP_221293144.1 | hypothetical protein | - |
| PszF2a_RS07025 (PszF2a_13740) | - | 1437092..1437640 (+) | 549 | WP_221293145.1 | hypothetical protein | - |
| PszF2a_RS07030 (PszF2a_13750) | - | 1437643..1438239 (+) | 597 | WP_221293146.1 | hypothetical protein | - |
| PszF2a_RS07035 (PszF2a_13760) | - | 1438239..1438709 (+) | 471 | WP_221293147.1 | hypothetical protein | - |
| PszF2a_RS07040 (PszF2a_13770) | - | 1438718..1438891 (+) | 174 | WP_221293148.1 | hypothetical protein | - |
| PszF2a_RS07045 (PszF2a_13780) | - | 1438950..1439702 (+) | 753 | WP_245002921.1 | hypothetical protein | - |
| PszF2a_RS07050 | - | 1439786..1440238 (+) | 453 | WP_221293149.1 | hypothetical protein | - |
| PszF2a_RS07055 (PszF2a_13800) | - | 1440300..1443473 (+) | 3174 | WP_221293150.1 | phage tail length tape measure family protein | - |
| PszF2a_RS07060 (PszF2a_13810) | - | 1443470..1443877 (+) | 408 | WP_221293151.1 | hypothetical protein | - |
| PszF2a_RS07065 (PszF2a_13820) | - | 1443919..1445910 (+) | 1992 | WP_221293152.1 | hypothetical protein | - |
| PszF2a_RS07070 (PszF2a_13830) | - | 1445918..1447459 (+) | 1542 | WP_221293153.1 | hypothetical protein | - |
| PszF2a_RS07075 | - | 1447459..1449075 (+) | 1617 | WP_221293154.1 | hypothetical protein | - |
| PszF2a_RS07080 (PszF2a_13850) | - | 1449081..1450922 (+) | 1842 | WP_245002922.1 | hypothetical protein | - |
| PszF2a_RS07085 (PszF2a_13860) | - | 1450922..1451158 (+) | 237 | WP_221293155.1 | hypothetical protein | - |
| PszF2a_RS07090 (PszF2a_13870) | - | 1451228..1451416 (+) | 189 | WP_221293156.1 | hypothetical protein | - |
| PszF2a_RS07095 (PszF2a_13890) | - | 1452067..1452699 (+) | 633 | WP_221293157.1 | glycoside hydrolase family 19 protein | - |
| PszF2a_RS07100 (PszF2a_13900) | - | 1452696..1453172 (+) | 477 | WP_221293158.1 | DUF2514 family protein | - |
| PszF2a_RS07105 (PszF2a_13910) | - | 1453302..1454012 (+) | 711 | WP_221293159.1 | hypothetical protein | - |
| PszF2a_RS07110 (PszF2a_13920) | - | 1454098..1454799 (-) | 702 | WP_221293160.1 | SOS response-associated peptidase family protein | - |
| PszF2a_RS07115 (PszF2a_13930) | - | 1454900..1455325 (+) | 426 | WP_221293161.1 | LexA family protein | - |
| PszF2a_RS07120 (PszF2a_13940) | umuC | 1455313..1456569 (+) | 1257 | WP_221293162.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PszF2a_RS07125 (PszF2a_13960) | - | 1457994..1459097 (+) | 1104 | WP_011912669.1 | acyltransferase family protein | - |
| PszF2a_RS07130 (PszF2a_13970) | - | 1459213..1459710 (+) | 498 | WP_026006508.1 | CinA family protein | - |
| PszF2a_RS07135 (PszF2a_13980) | recA | 1459794..1460840 (+) | 1047 | WP_014596281.1 | recombinase RecA | Machinery gene |
| PszF2a_RS07140 (PszF2a_13990) | recX | 1460846..1461313 (+) | 468 | WP_013982303.1 | recombination regulator RecX | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37134.57 Da Isoelectric Point: 5.5400
>NTDB_id=87691 PszF2a_RS07135 WP_014596281.1 1459794..1460840(+) (recA) [Stutzerimonas stutzeri strain F2a]
MDENKKRALAAALGQIEKQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQGKANAAKFLEDNPEIGREIEQ
QIRDKLLVVSGGSSKANVVSEDLVDADL
MDENKKRALAAALGQIEKQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKMGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
AHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYRNGEIIDLGVQQGLVEKSGAWYAYKGNKIGQGKANAAKFLEDNPEIGREIEQ
QIRDKLLVVSGGSSKANVVSEDLVDADL
Nucleotide
Download Length: 1047 bp
>NTDB_id=87691 PszF2a_RS07135 WP_014596281.1 1459794..1460840(+) (recA) [Stutzerimonas stutzeri strain F2a]
ATGGACGAGAACAAGAAGCGCGCCTTGGCTGCAGCCCTGGGCCAGATTGAAAAGCAGTTCGGCAAGGGTGCAGTGATGCG
CATGGGCGATCACGATCGCCAGGCGATTCCGGCCATCTCCACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCATCGGCG
GCCTGCCGAAGGGCCGGATCGTCGAGATCTACGGTCCGGAATCGTCCGGTAAGACCACTCTGACGCTGTCGGTGATTGCC
GAAGCGCAGAAGATGGGCGCCACCTGTGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGACTACGCCGGCAAGCTGGG
CGTGAATGTCGACGATCTGCTGGTTTCGCAGCCGGATACCGGCGAACAGGCTCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCGGTCGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGTGAT
GCCCACGTCGGCCTGCAGGCCCGTCTGATGTCCCAGGCTCTGCGCAAGATCACCGGCAACATCAAGAACGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTTGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTGGATATCCGTCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTGGTCGGCAGCGAA
ACCCGTGTCAAGGTGGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGAGTTCCAGATCCTCTACGGCAAGGGCAT
CTACCGCAACGGCGAGATCATCGACCTCGGCGTGCAGCAGGGGCTGGTGGAGAAGTCCGGCGCCTGGTACGCCTACAAAG
GCAACAAGATCGGCCAGGGCAAGGCCAACGCCGCCAAGTTCCTGGAAGACAACCCGGAAATCGGTCGCGAAATCGAACAG
CAGATCCGCGACAAGCTGCTGGTGGTTTCCGGCGGTAGCAGCAAGGCGAACGTGGTCAGCGAAGATCTGGTCGACGCCGA
TCTCTGA
ATGGACGAGAACAAGAAGCGCGCCTTGGCTGCAGCCCTGGGCCAGATTGAAAAGCAGTTCGGCAAGGGTGCAGTGATGCG
CATGGGCGATCACGATCGCCAGGCGATTCCGGCCATCTCCACCGGCTCGCTGGGTCTGGACATCGCGCTGGGCATCGGCG
GCCTGCCGAAGGGCCGGATCGTCGAGATCTACGGTCCGGAATCGTCCGGTAAGACCACTCTGACGCTGTCGGTGATTGCC
GAAGCGCAGAAGATGGGCGCCACCTGTGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGGACTACGCCGGCAAGCTGGG
CGTGAATGTCGACGATCTGCTGGTTTCGCAGCCGGATACCGGCGAACAGGCTCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCGGTCGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTGCCCAAGGCCGAGATCGAAGGCGAGATGGGTGAT
GCCCACGTCGGCCTGCAGGCCCGTCTGATGTCCCAGGCTCTGCGCAAGATCACCGGCAACATCAAGAACGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTTGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTGGATATCCGTCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTGGTCGGCAGCGAA
ACCCGTGTCAAGGTGGTGAAGAACAAGGTGGCCCCGCCGTTCCGTCAGGCCGAGTTCCAGATCCTCTACGGCAAGGGCAT
CTACCGCAACGGCGAGATCATCGACCTCGGCGTGCAGCAGGGGCTGGTGGAGAAGTCCGGCGCCTGGTACGCCTACAAAG
GCAACAAGATCGGCCAGGGCAAGGCCAACGCCGCCAAGTTCCTGGAAGACAACCCGGAAATCGGTCGCGAAATCGAACAG
CAGATCCGCGACAAGCTGCTGGTGGTTTCCGGCGGTAGCAGCAAGGCGAACGTGGTCAGCGAAGATCTGGTCGACGCCGA
TCTCTGA
Similar proteins
Only experimentally validated proteins are listed.