Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | Q8Z25_RS16230 | Genome accession | NZ_CP131998 |
| Coordinates | 3297694..3298803 (+) | Length | 369 a.a. |
| NCBI ID | WP_273908525.1 | Uniprot ID | - |
| Organism | Enterobacter hormaechei strain MRSN791417 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3286630..3329453 | 3297694..3298803 | within | 0 |
Gene organization within MGE regions
Location: 3286630..3329453
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q8Z25_RS16150 (Q8Z25_16155) | - | 3286630..3287748 (-) | 1119 | WP_305869363.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| Q8Z25_RS16155 (Q8Z25_16160) | - | 3287723..3287986 (-) | 264 | WP_023303435.1 | hypothetical protein | - |
| Q8Z25_RS16160 (Q8Z25_16165) | - | 3288054..3290105 (-) | 2052 | WP_305869365.1 | exonuclease | - |
| Q8Z25_RS16165 (Q8Z25_16170) | - | 3290282..3290464 (-) | 183 | WP_075211551.1 | DUF1482 family protein | - |
| Q8Z25_RS16170 (Q8Z25_16175) | - | 3290461..3290583 (-) | 123 | WP_255518230.1 | hypothetical protein | - |
| Q8Z25_RS16175 (Q8Z25_16180) | - | 3290867..3291295 (-) | 429 | WP_080396121.1 | helix-turn-helix domain-containing protein | - |
| Q8Z25_RS16180 (Q8Z25_16185) | - | 3291385..3291615 (+) | 231 | WP_072202864.1 | YdaS family helix-turn-helix protein | - |
| Q8Z25_RS16185 (Q8Z25_16190) | - | 3291618..3292172 (+) | 555 | WP_058647416.1 | toxin YdaT family protein | - |
| Q8Z25_RS16190 (Q8Z25_16195) | - | 3292209..3293267 (+) | 1059 | WP_058647415.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| Q8Z25_RS16195 (Q8Z25_16200) | - | 3293179..3293724 (+) | 546 | WP_226864515.1 | replication protein P | - |
| Q8Z25_RS16200 (Q8Z25_16205) | - | 3293739..3294158 (+) | 420 | WP_305869371.1 | PerC family transcriptional regulator | - |
| Q8Z25_RS16205 (Q8Z25_16210) | - | 3294162..3294422 (+) | 261 | WP_012132763.1 | DUF977 family protein | - |
| Q8Z25_RS16210 (Q8Z25_16215) | - | 3294419..3294751 (+) | 333 | WP_022651653.1 | hypothetical protein | - |
| Q8Z25_RS16215 (Q8Z25_16220) | - | 3294748..3295335 (+) | 588 | WP_305869374.1 | hypothetical protein | - |
| Q8Z25_RS16220 (Q8Z25_16225) | - | 3295335..3295592 (+) | 258 | WP_047642195.1 | hypothetical protein | - |
| Q8Z25_RS16225 (Q8Z25_16230) | - | 3295589..3297472 (+) | 1884 | WP_305869377.1 | DNA cytosine methyltransferase | - |
| Q8Z25_RS16230 (Q8Z25_16235) | recA | 3297694..3298803 (+) | 1110 | WP_273908525.1 | recombinase RecA | Machinery gene |
| Q8Z25_RS16235 (Q8Z25_16240) | - | 3299120..3299521 (+) | 402 | WP_305869381.1 | DNA-binding protein | - |
| Q8Z25_RS16240 (Q8Z25_16245) | - | 3299518..3299718 (+) | 201 | WP_023303451.1 | hypothetical protein | - |
| Q8Z25_RS16245 (Q8Z25_16250) | - | 3299726..3300745 (+) | 1020 | WP_023303452.1 | DUF968 domain-containing protein | - |
| Q8Z25_RS16250 (Q8Z25_16255) | - | 3300758..3301363 (+) | 606 | WP_148735426.1 | hypothetical protein | - |
| Q8Z25_RS16270 (Q8Z25_16275) | - | 3302254..3302658 (+) | 405 | WP_032619483.1 | putative holin | - |
| Q8Z25_RS16275 (Q8Z25_16280) | - | 3302655..3302951 (+) | 297 | WP_044489029.1 | phage holin family protein | - |
| Q8Z25_RS16280 (Q8Z25_16285) | - | 3302948..3303577 (+) | 630 | WP_305869385.1 | glycoside hydrolase family 19 protein | - |
| Q8Z25_RS16285 (Q8Z25_16290) | - | 3303585..3303863 (+) | 279 | WP_369686703.1 | hypothetical protein | - |
| Q8Z25_RS16290 (Q8Z25_16295) | - | 3303814..3304002 (+) | 189 | WP_074147575.1 | hypothetical protein | - |
| Q8Z25_RS16295 (Q8Z25_16300) | - | 3304059..3304634 (-) | 576 | WP_305869387.1 | YfbU family protein | - |
| Q8Z25_RS16300 (Q8Z25_16305) | - | 3304616..3305596 (-) | 981 | WP_032637327.1 | IS5-like element ISKpn26 family transposase | - |
| Q8Z25_RS16305 (Q8Z25_16310) | - | 3306083..3306586 (+) | 504 | WP_023299857.1 | DUF1441 family protein | - |
| Q8Z25_RS16310 (Q8Z25_16315) | - | 3306590..3308710 (+) | 2121 | WP_080340105.1 | phage terminase large subunit family protein | - |
| Q8Z25_RS16315 (Q8Z25_16320) | - | 3308707..3308922 (+) | 216 | WP_023299859.1 | hypothetical protein | - |
| Q8Z25_RS16320 (Q8Z25_16325) | - | 3308931..3310451 (+) | 1521 | WP_305869392.1 | phage portal protein | - |
| Q8Z25_RS16325 (Q8Z25_16330) | - | 3310441..3312501 (+) | 2061 | WP_045911474.1 | ClpP-like prohead protease/major capsid protein fusion protein | - |
| Q8Z25_RS16330 (Q8Z25_16335) | - | 3312571..3312906 (+) | 336 | WP_032658106.1 | DUF2190 family protein | - |
| Q8Z25_RS16335 (Q8Z25_16340) | - | 3312906..3313262 (+) | 357 | WP_023303463.1 | hypothetical protein | - |
| Q8Z25_RS16340 (Q8Z25_16345) | - | 3313264..3313926 (+) | 663 | WP_023299864.1 | hypothetical protein | - |
| Q8Z25_RS16345 (Q8Z25_16350) | - | 3313935..3314489 (+) | 555 | WP_023303465.1 | hypothetical protein | - |
| Q8Z25_RS16350 (Q8Z25_16355) | - | 3314482..3315105 (+) | 624 | WP_032619493.1 | phage baseplate assembly protein V | - |
| Q8Z25_RS16355 (Q8Z25_16360) | - | 3315144..3316613 (+) | 1470 | WP_045911473.1 | phage tail sheath C-terminal domain-containing protein | - |
| Q8Z25_RS16360 (Q8Z25_16365) | - | 3316610..3317116 (+) | 507 | WP_045911472.1 | phage major tail tube protein | - |
| Q8Z25_RS16365 (Q8Z25_16370) | - | 3317168..3317455 (+) | 288 | WP_023299869.1 | phage tail assembly protein | - |
| Q8Z25_RS16370 (Q8Z25_16375) | - | 3317570..3319660 (+) | 2091 | WP_045911471.1 | hypothetical protein | - |
| Q8Z25_RS16375 (Q8Z25_16380) | - | 3319657..3320127 (+) | 471 | WP_045345268.1 | phage tail protein | - |
| Q8Z25_RS16380 (Q8Z25_16385) | - | 3320102..3320317 (+) | 216 | WP_045899104.1 | tail protein X | - |
| Q8Z25_RS16385 (Q8Z25_16390) | - | 3320320..3321438 (+) | 1119 | WP_045911470.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| Q8Z25_RS16390 (Q8Z25_16395) | - | 3321477..3321830 (+) | 354 | WP_045325028.1 | GPW/gp25 family protein | - |
| Q8Z25_RS16395 (Q8Z25_16400) | - | 3321814..3322728 (+) | 915 | WP_045911469.1 | baseplate J/gp47 family protein | - |
| Q8Z25_RS16400 (Q8Z25_16405) | - | 3322721..3323272 (+) | 552 | WP_045899434.1 | phage tail protein I | - |
| Q8Z25_RS16405 (Q8Z25_16410) | - | 3323275..3325575 (+) | 2301 | WP_305869408.1 | phage tail protein | - |
| Q8Z25_RS16410 (Q8Z25_16415) | - | 3325577..3325999 (+) | 423 | WP_045340310.1 | tail fiber assembly protein | - |
| Q8Z25_RS16415 (Q8Z25_16420) | - | 3326003..3326569 (-) | 567 | WP_045911467.1 | serine acetyltransferase | - |
| Q8Z25_RS16420 (Q8Z25_16425) | - | 3326651..3327061 (-) | 411 | WP_059514143.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| Q8Z25_RS16425 (Q8Z25_16430) | - | 3327083..3327262 (-) | 180 | WP_012906750.1 | type II toxin-antitoxin system HicA family toxin | - |
| Q8Z25_RS16430 (Q8Z25_16435) | potB | 3327488..3328351 (-) | 864 | WP_305869418.1 | spermidine/putrescine ABC transporter permease PotB | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 39734.33 Da Isoelectric Point: 5.2017
>NTDB_id=866584 Q8Z25_RS16230 WP_273908525.1 3297694..3298803(+) (recA) [Enterobacter hormaechei strain MRSN791417]
MAVDKKKPVLSDKTKPSTREEKEKALTAAMGQIEKAFGKGAIMRLGDGSHLNVEMVPTGSLGLDIALGGGFPVGRISEIY
GPESSGKTTVALSAIASAQREGRQCAFIDAEHALDPRYAQQLGVDIDNLLISQPDTGEQALEITDALVRSGAVGLIVVDS
VAALVPKSELEGEIGDAQMGLQARMMGQAMRKLAGEVSKTKTIVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDV
RSRTIKEGDQITGKDTTIKVVKNKVSPPFKQASYRLMFGQGISRSDEILELGVKLKLINKTGAWYDYLGEKLGNGRNNAV
TWLNEHPDIAAEIEGQIREKALNNDPDLTAIQSASAEETLEVTDTFENE
MAVDKKKPVLSDKTKPSTREEKEKALTAAMGQIEKAFGKGAIMRLGDGSHLNVEMVPTGSLGLDIALGGGFPVGRISEIY
GPESSGKTTVALSAIASAQREGRQCAFIDAEHALDPRYAQQLGVDIDNLLISQPDTGEQALEITDALVRSGAVGLIVVDS
VAALVPKSELEGEIGDAQMGLQARMMGQAMRKLAGEVSKTKTIVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDV
RSRTIKEGDQITGKDTTIKVVKNKVSPPFKQASYRLMFGQGISRSDEILELGVKLKLINKTGAWYDYLGEKLGNGRNNAV
TWLNEHPDIAAEIEGQIREKALNNDPDLTAIQSASAEETLEVTDTFENE
Nucleotide
Download Length: 1110 bp
>NTDB_id=866584 Q8Z25_RS16230 WP_273908525.1 3297694..3298803(+) (recA) [Enterobacter hormaechei strain MRSN791417]
ATGGCCGTTGATAAGAAAAAACCTGTTCTGTCCGACAAAACAAAACCATCAACAAGGGAAGAAAAAGAAAAGGCGCTCAC
AGCTGCAATGGGACAGATCGAAAAAGCCTTTGGCAAGGGAGCCATTATGCGTCTTGGTGACGGTTCACATTTAAATGTTG
AAATGGTTCCAACTGGTTCCCTCGGGTTGGATATTGCCCTGGGTGGTGGTTTTCCGGTTGGGCGTATCTCTGAAATTTAC
GGCCCAGAGTCATCTGGTAAAACTACGGTAGCGCTTTCTGCGATTGCCAGCGCACAGCGTGAAGGCCGACAGTGTGCTTT
CATCGATGCTGAGCATGCTCTTGATCCCCGATATGCACAGCAGTTAGGTGTGGATATTGATAATTTGCTCATATCCCAGC
CTGACACCGGCGAACAGGCACTTGAAATTACAGATGCGCTGGTTCGTTCCGGAGCCGTTGGCCTGATTGTCGTAGATTCC
GTGGCTGCCCTGGTGCCTAAGTCTGAGCTTGAAGGTGAAATAGGGGATGCGCAGATGGGACTTCAGGCGCGAATGATGGG
GCAAGCCATGCGCAAACTTGCGGGAGAGGTCAGTAAAACAAAAACCATCGTTATTTTCATCAACCAGTTACGCATGAAAA
TAGGGGTCATGTTCGGTAATCCTGAAACTACTACCGGCGGAAACGCCCTTAAATTTTACGCCTCCGTTCGCCTCGACGTC
AGATCACGAACCATCAAAGAAGGTGACCAGATCACCGGTAAAGACACCACGATAAAAGTCGTCAAAAATAAAGTTTCACC
ACCATTCAAACAGGCATCCTACCGTCTCATGTTCGGTCAAGGGATTTCTCGGTCCGATGAAATTCTTGAGCTTGGCGTGA
AGCTTAAATTGATAAATAAAACAGGTGCATGGTACGACTACCTTGGTGAAAAGCTTGGTAATGGCCGCAATAACGCTGTC
ACCTGGCTTAACGAGCATCCCGATATAGCTGCTGAAATTGAGGGGCAGATTCGGGAAAAAGCACTTAACAACGATCCTGA
TTTAACCGCAATTCAGAGCGCTTCAGCCGAGGAAACCTTAGAAGTGACTGACACCTTTGAAAACGAGTAA
ATGGCCGTTGATAAGAAAAAACCTGTTCTGTCCGACAAAACAAAACCATCAACAAGGGAAGAAAAAGAAAAGGCGCTCAC
AGCTGCAATGGGACAGATCGAAAAAGCCTTTGGCAAGGGAGCCATTATGCGTCTTGGTGACGGTTCACATTTAAATGTTG
AAATGGTTCCAACTGGTTCCCTCGGGTTGGATATTGCCCTGGGTGGTGGTTTTCCGGTTGGGCGTATCTCTGAAATTTAC
GGCCCAGAGTCATCTGGTAAAACTACGGTAGCGCTTTCTGCGATTGCCAGCGCACAGCGTGAAGGCCGACAGTGTGCTTT
CATCGATGCTGAGCATGCTCTTGATCCCCGATATGCACAGCAGTTAGGTGTGGATATTGATAATTTGCTCATATCCCAGC
CTGACACCGGCGAACAGGCACTTGAAATTACAGATGCGCTGGTTCGTTCCGGAGCCGTTGGCCTGATTGTCGTAGATTCC
GTGGCTGCCCTGGTGCCTAAGTCTGAGCTTGAAGGTGAAATAGGGGATGCGCAGATGGGACTTCAGGCGCGAATGATGGG
GCAAGCCATGCGCAAACTTGCGGGAGAGGTCAGTAAAACAAAAACCATCGTTATTTTCATCAACCAGTTACGCATGAAAA
TAGGGGTCATGTTCGGTAATCCTGAAACTACTACCGGCGGAAACGCCCTTAAATTTTACGCCTCCGTTCGCCTCGACGTC
AGATCACGAACCATCAAAGAAGGTGACCAGATCACCGGTAAAGACACCACGATAAAAGTCGTCAAAAATAAAGTTTCACC
ACCATTCAAACAGGCATCCTACCGTCTCATGTTCGGTCAAGGGATTTCTCGGTCCGATGAAATTCTTGAGCTTGGCGTGA
AGCTTAAATTGATAAATAAAACAGGTGCATGGTACGACTACCTTGGTGAAAAGCTTGGTAATGGCCGCAATAACGCTGTC
ACCTGGCTTAACGAGCATCCCGATATAGCTGCTGAAATTGAGGGGCAGATTCGGGAAAAAGCACTTAACAACGATCCTGA
TTTAACCGCAATTCAGAGCGCTTCAGCCGAGGAAACCTTAGAAGTGACTGACACCTTTGAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.