Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   Q7572_RS07875 Genome accession   NZ_CP131878
Coordinates   1638265..1639317 (-) Length   350 a.a.
NCBI ID   WP_004886891.1    Uniprot ID   A0A0A8J946
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1633265..1644317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS07840 (Q7572_07850) - 1633506..1634009 (+) 504 WP_002049593.1 OmpH family outer membrane protein -
  Q7572_RS07845 (Q7572_07855) lpxD 1634014..1635084 (+) 1071 WP_342049684.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  Q7572_RS07850 (Q7572_07860) fabZ 1635091..1635576 (+) 486 WP_002049600.1 3-hydroxyacyl-ACP dehydratase FabZ -
  Q7572_RS07855 (Q7572_07865) lpxA 1635573..1636361 (+) 789 WP_002049604.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  Q7572_RS07860 (Q7572_07870) - 1636417..1637301 (-) 885 WP_004886888.1 YbgF trimerization domain-containing protein -
  Q7572_RS07870 (Q7572_07880) - 1637728..1638210 (-) 483 WP_004886889.1 regulatory protein RecX -
  Q7572_RS07875 (Q7572_07885) recA 1638265..1639317 (-) 1053 WP_004886891.1 recombinase RecA Machinery gene
  Q7572_RS07880 (Q7572_07890) - 1639463..1639903 (-) 441 WP_342049697.1 S4 domain-containing protein -
  Q7572_RS07885 (Q7572_07895) - 1639887..1640573 (-) 687 WP_004886894.1 HAD-IA family hydrolase -
  Q7572_RS07890 (Q7572_07900) - 1640934..1641170 (+) 237 WP_004886896.1 hypothetical protein -
  Q7572_RS07895 (Q7572_07905) - 1641285..1641578 (+) 294 WP_004708422.1 hypothetical protein -
  Q7572_RS07900 (Q7572_07910) - 1641630..1642166 (-) 537 WP_004886899.1 GNAT family N-acetyltransferase -
  Q7572_RS07905 (Q7572_07915) gigD 1642210..1642659 (-) 450 WP_004886900.1 Lrp/AsnC family transcriptional regulator GigD -
  Q7572_RS07910 (Q7572_07920) kynU 1642806..1644056 (+) 1251 WP_004886901.1 kynureninase -

Sequence


Protein


Download         Length: 350 a.a.        Molecular weight: 38100.45 Da        Isoelectric Point: 4.8604

>NTDB_id=865718 Q7572_RS07875 WP_004886891.1 1638265..1639317(-) (recA) [Acinetobacter nosocomialis strain 2014S01-097]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENKHIAEEIER
NIREQLLTTGTNGTVQIEDDEEEPDLLLES

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=865718 Q7572_RS07875 WP_004886891.1 1638265..1639317(-) (recA) [Acinetobacter nosocomialis strain 2014S01-097]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAACAATTTGGTAAAAATACGGTTATGCG
TCTCGGTGACAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATTGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTACAAGCAATTGCT
CAATGTCAAAAGTCTGGTGGTACATGTGCCTTCATCGATGCAGAGCATGCCCTAGATCCTCAATATGCACGTAAGCTTGG
TGTAGATATTGATAACCTACTCGTTTCACAACCTGATAATGGTGAGCAAGCGCTTGAAATCGCTGATATGCTTGTTCGCT
CAGGTGCAATTGATTTAATCGTTGTGGACTCAGTAGCTGCTCTTACACCTAAAGCAGAGATTGAAGGCGAAATGGGTGAC
TCTCATATGGGTCTACAAGCACGTCTTATGAGCCAAGCACTTCGTAAAATTACTGGTAACGCTAAACGTTCAAACTGTAT
GGTTATCTTTATTAACCAAATCCGTATGAAGATTGGTGTTATGTTTGGTAGCCCAGAAACCACGACTGGTGGTAACGCTC
TTAAGTTCTATGCTTCAGTTCGTCTAGATATTCGTCGTATTGGTCAGGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAATAAAATGGCTCCTCCTTTTAGAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAATTAGGTGAACTTGTAGATTTGGCAGTACAGCAAGATATCGTTCAGAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAGAATAATGTGATCCGCTATTTTGAAGAAAATAAACACATTGCTGAAGAGATTGAACGC
AATATCCGTGAGCAATTGTTGACTACAGGTACAAATGGCACAGTGCAAATTGAAGATGATGAAGAAGAACCAGATCTTTT
ATTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A8J946

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

98.571

100

0.986

  recA Acinetobacter baylyi ADP1

92.795

99.143

0.92

  recA Pseudomonas stutzeri DSM 10701

75.904

94.857

0.72

  recA Vibrio cholerae strain A1552

73.394

93.429

0.686

  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.394

93.429

0.686

  recA Glaesserella parasuis strain SC1401

71.914

92.571

0.666

  recA Neisseria gonorrhoeae MS11

65.812

100

0.66

  recA Neisseria gonorrhoeae MS11

65.812

100

0.66

  recA Neisseria gonorrhoeae strain FA1090

65.812

100

0.66

  recA Ralstonia pseudosolanacearum GMI1000

70.122

93.714

0.657

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.899

98.571

0.62

  recA Helicobacter pylori strain NCTC11637

63.158

97.714

0.617

  recA Helicobacter pylori 26695

62.865

97.714

0.614

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.444

94.571

0.6

  recA Streptococcus pneumoniae D39

59.827

98.857

0.591

  recA Streptococcus pneumoniae Rx1

59.827

98.857

0.591

  recA Streptococcus pneumoniae R6

59.827

98.857

0.591

  recA Streptococcus pneumoniae TIGR4

59.827

98.857

0.591

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.577

93.143

0.583

  recA Bacillus subtilis subsp. subtilis str. 168

63.043

92

0.58

  recA Streptococcus mitis NCTC 12261

61.656

93.143

0.574

  recA Streptococcus mutans UA159

61.28

93.714

0.574

  recA Streptococcus mitis SK321

61.35

93.143

0.571

  recA Streptococcus pyogenes NZ131

61.538

92.857

0.571

  recA Lactococcus lactis subsp. cremoris KW2

58.514

92.286

0.54

  recA Latilactobacillus sakei subsp. sakei 23K

58.255

91.714

0.534