Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | Q6385_RS03825 | Genome accession | NZ_CP130893 |
| Coordinates | 737803..738849 (+) | Length | 348 a.a. |
| NCBI ID | WP_003688695.1 | Uniprot ID | Q5F8M9 |
| Organism | Neisseria gonorrhoeae strain NJ1914646 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 730718..805764 | 737803..738849 | within | 0 |
Gene organization within MGE regions
Location: 730718..805764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q6385_RS03800 (Q6385_03800) | - | 730718..731788 (-) | 1071 | WP_010360162.1 | integrase arm-type DNA-binding domain-containing protein | - |
| Q6385_RS03805 (Q6385_03805) | - | 731997..732776 (-) | 780 | WP_003688701.1 | ferredoxin--NADP reductase | - |
| Q6385_RS03810 (Q6385_03810) | dinB | 733676..734734 (+) | 1059 | WP_003695315.1 | DNA polymerase IV | - |
| Q6385_RS03815 (Q6385_03815) | rep | 734804..736819 (-) | 2016 | WP_012503651.1 | DNA helicase Rep | - |
| Q6385_RS03820 (Q6385_03820) | aroD | 736839..737603 (-) | 765 | WP_003688696.1 | type I 3-dehydroquinate dehydratase | - |
| Q6385_RS03825 (Q6385_03825) | recA | 737803..738849 (+) | 1047 | WP_003688695.1 | recombinase RecA | Machinery gene |
| Q6385_RS03830 (Q6385_03830) | - | 739502..739837 (-) | 336 | WP_003688693.1 | YbaB/EbfC family nucleoid-associated protein | - |
| Q6385_RS03835 (Q6385_03835) | dnaX | 739918..742041 (-) | 2124 | WP_003695312.1 | DNA polymerase III subunit gamma/tau | - |
| Q6385_RS03840 (Q6385_03840) | mutL | 742136..744100 (-) | 1965 | WP_047926984.1 | DNA mismatch repair endonuclease MutL | - |
| Q6385_RS03845 (Q6385_03845) | - | 744244..744429 (+) | 186 | WP_003688687.1 | DUF3460 family protein | - |
| Q6385_RS03850 (Q6385_03850) | - | 744440..745108 (+) | 669 | WP_003688686.1 | class I SAM-dependent methyltransferase | - |
| Q6385_RS03855 (Q6385_03855) | - | 745108..745821 (+) | 714 | WP_003697104.1 | tol-pal system YbgF family protein | - |
| Q6385_RS03860 (Q6385_03860) | purE | 745869..746354 (+) | 486 | WP_003688684.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| Q6385_RS03865 (Q6385_03865) | - | 746566..747376 (-) | 811 | Protein_750 | transposase | - |
| Q6385_RS03870 (Q6385_03870) | - | 747747..748112 (+) | 366 | Protein_751 | transposase | - |
| Q6385_RS03875 (Q6385_03875) | - | 748134..749138 (+) | 1005 | Protein_752 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| Q6385_RS03880 (Q6385_03880) | - | 749339..749995 (-) | 657 | WP_003688682.1 | response regulator transcription factor | - |
| Q6385_RS03885 (Q6385_03885) | - | 749992..751761 (-) | 1770 | WP_003688681.1 | histidine kinase | - |
| Q6385_RS03890 (Q6385_03890) | - | 751968..752582 (+) | 615 | WP_047917856.1 | molybdenum cofactor guanylyltransferase | - |
| Q6385_RS03895 (Q6385_03895) | - | 752745..753362 (+) | 618 | WP_010358100.1 | riboflavin synthase | - |
| Q6385_RS03900 (Q6385_03900) | - | 753370..754233 (+) | 864 | WP_003693081.1 | ATP-binding protein | - |
| Q6385_RS03905 (Q6385_03905) | - | 754246..754680 (-) | 435 | WP_003688677.1 | Spy/CpxP family protein refolding chaperone | - |
| Q6385_RS03910 (Q6385_03910) | rpe | 754826..755509 (+) | 684 | WP_003688675.1 | ribulose-phosphate 3-epimerase | - |
| Q6385_RS03915 (Q6385_03915) | ruvB | 755754..756785 (-) | 1032 | WP_003688673.1 | Holliday junction branch migration DNA helicase RuvB | - |
| Q6385_RS03920 (Q6385_03920) | - | 756867..757175 (-) | 309 | WP_003688671.1 | hypothetical protein | - |
| Q6385_RS03925 (Q6385_03925) | - | 757594..758826 (-) | 1233 | WP_003702731.1 | multifunctional CCA addition/repair protein | - |
| Q6385_RS03930 (Q6385_03930) | - | 758905..760533 (-) | 1629 | WP_010951119.1 | ABC-F family ATPase | - |
| Q6385_RS03935 (Q6385_03935) | - | 760683..761057 (+) | 375 | WP_003688664.1 | arsenate reductase | - |
| Q6385_RS03940 (Q6385_03940) | - | 761106..762644 (+) | 1539 | WP_003695299.1 | SurA N-terminal domain-containing protein | - |
| Q6385_RS03945 (Q6385_03945) | recR | 762711..763328 (+) | 618 | WP_003688660.1 | recombination mediator RecR | - |
| Q6385_RS03950 (Q6385_03950) | - | 763384..763662 (-) | 279 | WP_003688659.1 | hypothetical protein | - |
| Q6385_RS03955 (Q6385_03955) | - | 763888..765135 (+) | 1248 | WP_003691197.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| Q6385_RS03960 (Q6385_03960) | lolD | 765128..765823 (+) | 696 | WP_003688655.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| Q6385_RS03965 (Q6385_03965) | recD | 765890..767635 (+) | 1746 | WP_003688652.1 | exodeoxyribonuclease V subunit alpha | Machinery gene |
| Q6385_RS03970 (Q6385_03970) | - | 767707..768353 (-) | 647 | Protein_771 | methyltransferase | - |
| Q6385_RS03975 (Q6385_03975) | - | 768361..769323 (+) | 963 | WP_127466217.1 | transposase | - |
| Q6385_RS03980 (Q6385_03980) | - | 769456..769911 (-) | 456 | Protein_773 | methyltransferase | - |
| Q6385_RS03985 (Q6385_03985) | lon | 770163..772625 (+) | 2463 | WP_003688644.1 | endopeptidase La | - |
| Q6385_RS03990 (Q6385_03990) | - | 772807..773076 (+) | 270 | WP_003688640.1 | HU family DNA-binding protein | - |
| Q6385_RS03995 (Q6385_03995) | - | 773252..773686 (-) | 435 | WP_003688638.1 | hypothetical protein | - |
| Q6385_RS04000 (Q6385_04000) | - | 773679..774986 (-) | 1308 | WP_103195193.1 | homoserine dehydrogenase | - |
| Q6385_RS04005 (Q6385_04005) | - | 775182..775553 (+) | 372 | WP_003688636.1 | Mth938-like domain-containing protein | - |
| Q6385_RS04010 (Q6385_04010) | - | 775630..777552 (+) | 1923 | WP_003691184.1 | ATP-binding cassette domain-containing protein | - |
| Q6385_RS04015 (Q6385_04015) | - | 777539..777934 (+) | 396 | WP_025456251.1 | hypothetical protein | - |
| Q6385_RS04020 (Q6385_04020) | - | 778025..778537 (+) | 513 | WP_003693093.1 | hypothetical protein | - |
| Q6385_RS04025 (Q6385_04025) | - | 778967..779662 (-) | 696 | WP_033910499.1 | DUF4400 domain-containing protein | - |
| Q6385_RS04030 (Q6385_04030) | traD | 779652..781694 (-) | 2043 | WP_012503640.1 | type IV conjugative transfer system coupling protein TraD | - |
| Q6385_RS04035 (Q6385_04035) | mobH | 781691..784243 (-) | 2553 | WP_012503639.1 | MobH family relaxase | - |
| Q6385_RS04040 (Q6385_04040) | - | 784240..784659 (-) | 420 | WP_003693104.1 | hypothetical protein | - |
| Q6385_RS04045 (Q6385_04045) | - | 785170..785631 (+) | 462 | WP_012503638.1 | lytic transglycosylase domain-containing protein | - |
| Q6385_RS04050 (Q6385_04050) | - | 785601..786122 (+) | 522 | WP_003695285.1 | OmpA family protein | - |
| Q6385_RS04055 (Q6385_04055) | traA | 786178..786474 (+) | 297 | WP_003697092.1 | TraA family conjugative transfer protein | - |
| Q6385_RS04060 (Q6385_04060) | traL | 786496..786777 (+) | 282 | WP_003693110.1 | type IV conjugative transfer system protein TraL | - |
| Q6385_RS04065 (Q6385_04065) | - | 786774..787439 (+) | 666 | WP_003704028.1 | conjugal transfer protein TraE | - |
| Q6385_RS04070 (Q6385_04070) | - | 787441..788175 (+) | 735 | WP_003693114.1 | type-F conjugative transfer system secretin TraK | - |
| Q6385_RS04075 (Q6385_04075) | - | 788177..789490 (+) | 1314 | WP_003697090.1 | TrbI/VirB10 family protein | - |
| Q6385_RS04080 (Q6385_04080) | - | 789500..790219 (+) | 720 | WP_003693119.1 | DsbC family protein | - |
| Q6385_RS04085 (Q6385_04085) | - | 790216..790797 (+) | 582 | WP_017146802.1 | TraV family lipoprotein | - |
| Q6385_RS04090 (Q6385_04090) | traC | 790807..793383 (+) | 2577 | WP_003693122.1 | type IV secretion system protein TraC | - |
| Q6385_RS04095 (Q6385_04095) | - | 793411..793959 (+) | 549 | WP_003695274.1 | hypothetical protein | - |
| Q6385_RS04100 (Q6385_04100) | - | 793959..794504 (+) | 546 | WP_003704029.1 | S26 family signal peptidase | - |
| Q6385_RS04105 (Q6385_04105) | - | 794513..795169 (+) | 657 | WP_003693128.1 | hypothetical protein | - |
| Q6385_RS04110 (Q6385_04110) | - | 795166..796284 (+) | 1119 | WP_003695266.1 | TraU family protein | - |
| Q6385_RS04115 (Q6385_04115) | - | 796311..796484 (-) | 174 | WP_228369789.1 | hypothetical protein | - |
| Q6385_RS04120 (Q6385_04120) | trbC | 796569..797051 (+) | 483 | WP_228369788.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| Q6385_RS04125 (Q6385_04125) | - | 797048..798292 (+) | 1245 | WP_003695263.1 | hypothetical protein | - |
| Q6385_RS04130 (Q6385_04130) | traN | 798331..799872 (+) | 1542 | WP_226876101.1 | conjugal transfer protein TraN | - |
| Q6385_RS04135 (Q6385_04135) | - | 799859..800284 (+) | 426 | WP_003693140.1 | hypothetical protein | - |
| Q6385_RS04140 (Q6385_04140) | - | 800296..801072 (+) | 777 | WP_012503632.1 | thioredoxin family protein | - |
| Q6385_RS04145 (Q6385_04145) | - | 801244..802755 (+) | 1512 | WP_041421275.1 | conjugal transfer protein TraH | - |
| Q6385_RS04150 (Q6385_04150) | - | 802762..805764 (+) | 3003 | WP_012503630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37642.87 Da Isoelectric Point: 4.8330
>NTDB_id=861786 Q6385_RS03825 WP_003688695.1 737803..738849(+) (recA) [Neisseria gonorrhoeae strain NJ1914646]
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEID
AKIRALNGVEMHITEGTQDETDGERPEE
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEID
AKIRALNGVEMHITEGTQDETDGERPEE
Nucleotide
Download Length: 1047 bp
>NTDB_id=861786 Q6385_RS03825 WP_003688695.1 737803..738849(+) (recA) [Neisseria gonorrhoeae strain NJ1914646]
ATGTCAGACGACAAAAGCAAAGCCCTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGCCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCCGAATCCTCCGGCAAAACCACACTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGTGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACGCTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCACGTCGGACTGCAGGCGCGCCTGATGAGTCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAATAC
GCTGGTTGTGTTCATCAACCAAATCCGAATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGCGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCCCCCCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAAGAAAACCCCGAAATTTCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCGTAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGACCCGA
AGAATAA
ATGTCAGACGACAAAAGCAAAGCCCTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGCCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCCGAATCCTCCGGCAAAACCACACTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGTGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACGCTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCACGTCGGACTGCAGGCGCGCCTGATGAGTCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAATAC
GCTGGTTGTGTTCATCAACCAAATCCGAATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGCGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCCCCCCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAAGAAAACCCCGAAATTTCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCGTAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGACCCGA
AGAATAA
Similar proteins
Only experimentally validated proteins are listed.