Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | QAD56_RS06540 | Genome accession | NZ_CP130625 |
| Coordinates | 1358999..1360042 (-) | Length | 347 a.a. |
| NCBI ID | WP_000963126.1 | Uniprot ID | K7Y3C2 |
| Organism | Helicobacter pylori strain BS08 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1353999..1365042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAD56_RS06510 (QAD56_06500) | - | 1354241..1355359 (+) | 1119 | WP_373930519.1 | glycosyltransferase family 8 protein | - |
| QAD56_RS06515 (QAD56_06505) | - | 1355356..1356312 (-) | 957 | WP_000952288.1 | PDC sensor domain-containing protein | - |
| QAD56_RS06520 (QAD56_06510) | - | 1356334..1356822 (-) | 489 | WP_001216271.1 | shikimate kinase | - |
| QAD56_RS06525 (QAD56_06515) | - | 1356827..1357423 (-) | 597 | WP_180453084.1 | AMIN domain-containing protein | - |
| QAD56_RS06530 (QAD56_06520) | - | 1357439..1357714 (-) | 276 | WP_373930522.1 | hypothetical protein | - |
| QAD56_RS06535 (QAD56_06525) | eno | 1357707..1358987 (-) | 1281 | WP_373930523.1 | phosphopyruvate hydratase | - |
| QAD56_RS06540 (QAD56_06530) | recA | 1358999..1360042 (-) | 1044 | WP_000963126.1 | recombinase RecA | Machinery gene |
| QAD56_RS06545 (QAD56_06535) | - | 1360141..1361004 (+) | 864 | WP_373930525.1 | menaquinone biosynthesis family protein | - |
| QAD56_RS06550 (QAD56_06540) | - | 1361001..1361768 (-) | 768 | WP_180393962.1 | hypothetical protein | - |
| QAD56_RS06555 (QAD56_06545) | - | 1361857..1362438 (-) | 582 | WP_373930527.1 | hypothetical protein | - |
| QAD56_RS06560 (QAD56_06550) | - | 1362450..1363034 (-) | 585 | WP_140604525.1 | hypothetical protein | - |
| QAD56_RS06565 (QAD56_06555) | - | 1363135..1363341 (-) | 207 | WP_120878481.1 | DUF4006 family protein | - |
| QAD56_RS06570 (QAD56_06560) | ccoP | 1363352..1364230 (-) | 879 | WP_373930529.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| QAD56_RS06575 (QAD56_06565) | - | 1364232..1364450 (-) | 219 | WP_001868213.1 | cytochrome c oxidase, cbb3-type, CcoQ subunit | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37669.40 Da Isoelectric Point: 5.7176
>NTDB_id=860765 QAD56_RS06540 WP_000963126.1 1358999..1360042(-) (recA) [Helicobacter pylori strain BS08]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
Nucleotide
Download Length: 1044 bp
>NTDB_id=860765 QAD56_RS06540 WP_000963126.1 1358999..1360042(-) (recA) [Helicobacter pylori strain BS08]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGTTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTTTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCATTTATTGACGCTGAGCATGCCTTAGATGTGCATTATGCTAAGAG
ATTGGGCGTGGATACGGAAAATCTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CAAGAAGCGGAGGGATTGATTTGGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACTGGTGTTTTGCATAAGATGAA
CACCACTTTAATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCGGCTTTAAAACAAAACGAACAGCATATC
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGTTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTTTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCATTTATTGACGCTGAGCATGCCTTAGATGTGCATTATGCTAAGAG
ATTGGGCGTGGATACGGAAAATCTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CAAGAAGCGGAGGGATTGATTTGGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACTGGTGTTTTGCATAAGATGAA
CACCACTTTAATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCGGCTTTAAAACAAAACGAACAGCATATC
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG
Similar proteins
Only experimentally validated proteins are listed.