Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | Q3F87_RS09600 | Genome accession | NZ_CP130328 |
| Coordinates | 1773987..1775030 (+) | Length | 347 a.a. |
| NCBI ID | WP_104426198.1 | Uniprot ID | - |
| Organism | Acinetobacter variabilis strain TB2-2B | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1768987..1780030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q3F87_RS09560 (Q3F87_09560) | rraA | 1768997..1769506 (-) | 510 | WP_125278329.1 | ribonuclease E activity regulator RraA | - |
| Q3F87_RS09565 (Q3F87_09565) | - | 1769519..1770184 (-) | 666 | WP_034702612.1 | NAD-dependent epimerase/dehydratase family protein | - |
| Q3F87_RS09570 (Q3F87_09570) | rpsT | 1770398..1770667 (+) | 270 | WP_004786139.1 | 30S ribosomal protein S20 | - |
| Q3F87_RS09575 (Q3F87_09575) | - | 1770805..1770927 (-) | 123 | WP_004786141.1 | hypothetical protein | - |
| Q3F87_RS09580 (Q3F87_09580) | - | 1771048..1771797 (-) | 750 | WP_104426195.1 | histidine phosphatase family protein | - |
| Q3F87_RS09585 (Q3F87_09585) | - | 1771858..1772709 (-) | 852 | WP_302699690.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| Q3F87_RS09590 (Q3F87_09590) | - | 1772722..1773408 (+) | 687 | WP_302699692.1 | HAD hydrolase-like protein | - |
| Q3F87_RS09595 (Q3F87_09595) | - | 1773401..1773841 (+) | 441 | WP_004786147.1 | RNA-binding S4 domain-containing protein | - |
| Q3F87_RS09600 (Q3F87_09600) | recA | 1773987..1775030 (+) | 1044 | WP_104426198.1 | recombinase RecA | Machinery gene |
| Q3F87_RS09605 (Q3F87_09605) | - | 1775106..1775720 (+) | 615 | WP_104426199.1 | regulatory protein RecX | - |
| Q3F87_RS09615 (Q3F87_09615) | - | 1776422..1777225 (+) | 804 | WP_104426200.1 | YbgF trimerization domain-containing protein | - |
| Q3F87_RS09620 (Q3F87_09620) | lpxA | 1777294..1778082 (-) | 789 | WP_004786156.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| Q3F87_RS09625 (Q3F87_09625) | fabZ | 1778079..1778564 (-) | 486 | WP_171064833.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| Q3F87_RS09630 (Q3F87_09630) | lpxD | 1778570..1779640 (-) | 1071 | WP_104426201.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37807.26 Da Isoelectric Point: 4.9603
>NTDB_id=857892 Q3F87_RS09600 WP_104426198.1 1773987..1775030(+) (recA) [Acinetobacter variabilis strain TB2-2B]
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTSKVVEDKDEEEPADFLDA
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTSKVVEDKDEEEPADFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=857892 Q3F87_RS09600 WP_104426198.1 1773987..1775030(+) (recA) [Acinetobacter variabilis strain TB2-2B]
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACAGGTTCTTTAACGCTTGATATCGCACTGGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAAACCACAATGACATTGCAAGCGATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCGCTTGATCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAACCAGACAACGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTGCGTT
CCGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGTGCCGAGATTGAAGGTGAAATGGGTGAC
TCACATATGGGTCTGCAAGCACGTTTGATGAGCCAGGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATCTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCGGAAACAACTACTGGTGGTAATGCAC
TTAAATTCTACGCTTCGGTACGTCTGGATATTCGCCGTATCGGTCAGGTAAAAGAAGGCGATGAGATTGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAATAAAATGGCACCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATTGTTCAGAAAGCGGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAGAACAATACCATCCGTTATCTGGAAGAACACAAAGAGCTGGCGGATACTATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAAGCAAAGTAGTCGAAGATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAA
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACAGGTTCTTTAACGCTTGATATCGCACTGGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAAACCACAATGACATTGCAAGCGATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCGCTTGATCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAACCAGACAACGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTGCGTT
CCGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGTGCCGAGATTGAAGGTGAAATGGGTGAC
TCACATATGGGTCTGCAAGCACGTTTGATGAGCCAGGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATCTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCGGAAACAACTACTGGTGGTAATGCAC
TTAAATTCTACGCTTCGGTACGTCTGGATATTCGCCGTATCGGTCAGGTAAAAGAAGGCGATGAGATTGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAATAAAATGGCACCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATTGTTCAGAAAGCGGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAGAACAATACCATCCGTTATCTGGAAGAACACAAAGAGCTGGCGGATACTATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAAGCAAAGTAGTCGAAGATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.