Detailed information NTG0085638

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DHCNIT_RS07000
• Genome accession: NZ_AP024514
• Coordinates: 1311421..1312434 (+)
• Length: 337 a.a.
• NCBI ID: WP_213164728.1
• Uniprot ID: -
• Organism: Dehalococcoides mccartyi strain NIT01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1306421..1317434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DHCNIT_RS06965 (DHCNIT_00013620)	tatC	1307635..1308423 (-)	789	WP_011310034.1	twin-arginine translocase subunit TatC	-
DHCNIT_RS06970 (DHCNIT_00013630)	-	1308420..1308710 (-)	291	WP_011310035.1	twin-arginine translocase TatA/TatE family subunit	-
DHCNIT_RS06975 (DHCNIT_00013640)	-	1308787..1309023 (-)	237	WP_034376979.1	twin-arginine translocase TatA/TatE family subunit	-
DHCNIT_RS06980 (DHCNIT_00013650)	tatA	1309115..1309312 (-)	198	WP_011310037.1	twin-arginine translocase TatA/TatE family subunit	-
DHCNIT_RS06985 (DHCNIT_00013660)	folP	1309560..1310408 (+)	849	WP_012034246.1	dihydropteroate synthase	-
DHCNIT_RS06990 (DHCNIT_00013670)	folK	1310399..1310926 (+)	528	WP_012034247.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
DHCNIT_RS06995 (DHCNIT_00013680)	queD	1310926..1311297 (+)	372	WP_015408053.1	6-carboxytetrahydropterin synthase QueD	-
DHCNIT_RS07000 (DHCNIT_00013690)	recA	1311421..1312434 (+)	1014	WP_213164728.1	recombinase RecA	Machinery gene
DHCNIT_RS07005 (DHCNIT_00013700)	-	1312522..1313166 (+)	645	WP_011310042.1	regulatory protein RecX	-
DHCNIT_RS07010 (DHCNIT_00013710)	rny	1313235..1314818 (+)	1584	WP_011310043.1	ribonuclease Y	-
DHCNIT_RS07015 (DHCNIT_00013720)	-	1314830..1315600 (+)	771	WP_011310044.1	TIGR00282 family metallophosphoesterase	-
DHCNIT_RS07020 (DHCNIT_00013730)	-	1315603..1316466 (+)	864	WP_012034250.1	PHP domain-containing protein	-
DHCNIT_RS07025 (DHCNIT_00013740)	-	1316463..1317161 (+)	699	WP_034376977.1	glycerol-3-phosphate acyltransferase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36058.41 Da
• Isoelectric Point: 6.2993

>NTDB_id=85638 DHCNIT_RS07000 WP_213164728.1 1311421..1312434(+) (recA) [Dehalococcoides mccartyi strain NIT01]
MTTEKDKALELTVGIIEKRFGKGSIMKLSDPSFRQTVEFIPTSSLALDIALGVGGIPRGRVAEIFGPEGSGKTTLAQHII
AQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGEEALGIAEELVRSAAIGVIVIDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTASIGQTRTAVVFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTVAVGT
RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVSSEVIRKAGAFFSYGDIRLGQGRESAKNYLAANPDLAQEIE
EKIRASAVTLCSIGDGD

Nucleotide

• Length: 1014 bp

>NTDB_id=85638 DHCNIT_RS07000 WP_213164728.1 1311421..1312434(+) (recA) [Dehalococcoides mccartyi strain NIT01]
ATGACCACGGAAAAAGATAAGGCTCTGGAACTCACTGTAGGCATAATAGAAAAACGCTTTGGCAAGGGTTCAATAATGAA
GTTGAGCGACCCTTCCTTCCGGCAAACAGTTGAGTTCATTCCTACAAGTTCACTGGCACTTGATATTGCCCTGGGCGTTG
GCGGGATTCCCAGAGGCCGGGTAGCTGAAATATTCGGTCCTGAAGGCTCTGGCAAGACTACTCTTGCCCAACACATTATT
GCCCAGGCCCAAAAAATGGGTGAAAAAGCCGCCTATATAGACGTGGAACATGCCCTTGATCCTAAATACGCTTCAACCTG
CGGGGTTAATCTGGATGAGCTTTTAATATCTCAACCGGATACCGGCGAAGAAGCGCTTGGTATTGCCGAAGAGCTGGTGA
GAAGTGCTGCCATAGGTGTAATCGTGATTGACAGTGTGGCGGCGCTGGTACCCAAAGCTGAAATAGAAGGCGAAATGGGT
GACTCACATGTAGGTTTGCAGGCCAGGCTTATGTCTCAGGCCCTGCGAAAATTGACCGCTTCCATCGGGCAAACCAGAAC
GGCCGTTGTCTTTATTAACCAGTTAAGAGAAAAGGTGGGTGTTATGTTCGGCAATCCCGAAGTCACCCCCGGCGGCCGGG
CGCTCAAGTTTTACAGTTCGGTGCGTATAGATCTAAGGCGCATAGAAACCATCAAGCAGGGTACCGTAGCTGTTGGTACA
CGCGTAAGAGCCAAAGTGGTAAAAAATAAGGTTGCTCCTCCTTTCAGGACAGCCGAATTTGATATCATGTTTGACTCCGG
TATCAGCCGCGAGGGCAACCTTATTGATTTAGGCGTAAGCAGTGAAGTTATAAGGAAAGCAGGGGCTTTCTTTTCCTATG
GTGACATTCGCCTGGGGCAAGGCAGAGAGAGCGCCAAAAACTATCTGGCGGCAAACCCGGATCTGGCGCAAGAAATTGAA
GAAAAAATACGTGCCTCAGCGGTCACCCTTTGCAGTATTGGCGATGGCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	62.848	95.846	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	62.112	95.549	0.593
recA	Neisseria gonorrhoeae strain FA1090	60	96.439	0.579
recA	Neisseria gonorrhoeae MS11	60	96.439	0.579
recA	Neisseria gonorrhoeae MS11	60	96.439	0.579
recA	Streptococcus mitis SK321	59.385	96.439	0.573
recA	Pseudomonas stutzeri DSM 10701	59.385	96.439	0.573
recA	Streptococcus mitis NCTC 12261	59.385	96.439	0.573
recA	Streptococcus pneumoniae R6	58.896	96.736	0.57
recA	Streptococcus pneumoniae Rx1	58.896	96.736	0.57
recA	Streptococcus pneumoniae D39	58.896	96.736	0.57
recA	Streptococcus pneumoniae TIGR4	58.896	96.736	0.57
recA	Streptococcus pyogenes NZ131	59.077	96.439	0.57
recA	Ralstonia pseudosolanacearum GMI1000	62.136	91.691	0.57
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.951	96.142	0.567
recA	Vibrio cholerae strain A1552	58.951	96.142	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.951	96.142	0.567
recA	Lactococcus lactis subsp. cremoris KW2	58.41	97.033	0.567
recA	Glaesserella parasuis strain SC1401	59.133	95.846	0.567
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.104	97.033	0.564
recA	Streptococcus mutans UA159	57.846	96.439	0.558
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.881	97.033	0.552
recA	Acinetobacter baylyi ADP1	56.024	98.516	0.552
recA	Helicobacter pylori strain NCTC11637	57.407	96.142	0.552
recA	Helicobacter pylori 26695	57.407	96.142	0.552
recA	Acinetobacter baumannii D1279779	55.389	99.11	0.549