Detailed information NTG0085266

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GSVR_RS19150
• Genome accession: NZ_AP024469
• Coordinates: 4081398..4082420 (-)
• Length: 340 a.a.
• NCBI ID: WP_173195406.1
• Uniprot ID: A0A6F9WRL8
• Organism: Geobacter sp. SVR
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4076398..4087420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSVR_RS19135 (GSVR_38540)	alaS	4077078..4079714 (-)	2637	WP_173195403.1	alanine--tRNA ligase	-
GSVR_RS19140 (GSVR_38550)	-	4079770..4080249 (-)	480	WP_173195404.1	regulatory protein RecX	-
GSVR_RS19145 (GSVR_38560)	-	4080230..4081384 (-)	1155	WP_173195405.1	type IV pilus twitching motility protein PilT	-
GSVR_RS19150 (GSVR_38570)	recA	4081398..4082420 (-)	1023	WP_173195406.1	recombinase RecA	Machinery gene
GSVR_RS19155 (GSVR_38580)	-	4082524..4083777 (-)	1254	WP_173195407.1	CinA family nicotinamide mononucleotide deamidase-related protein	-
GSVR_RS19160 (GSVR_38590)	larC	4083841..4085043 (-)	1203	WP_173195408.1	nickel pincer cofactor biosynthesis protein LarC	-
GSVR_RS19165 (GSVR_38600)	larB	4085213..4085962 (-)	750	WP_173195409.1	nickel pincer cofactor biosynthesis protein LarB	-
GSVR_RS19170 (GSVR_38610)	-	4086150..4087040 (+)	891	WP_173195410.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36464.94 Da
• Isoelectric Point: 6.5124

>NTDB_id=85266 GSVR_RS19150 WP_173195406.1 4081398..4082420(-) (recA) [Geobacter sp. SVR]
MSEKNTSPERNKAIDLALSQIEKQFGKGAIMRLGNDEVLPGVEAVSTGSISLDMALGVGGVPRGRIVEIYGPESSGKTTL
ALHVVAEAQKLGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEI
EGEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMDIRKIATLKQGD
AVIGSRTRVKVVKNKVAPPFREVEFDILYGEGISRTGDVLDLAVEKGIIEKSGAWYSYGKERIGQGRENSRTWLSEHPDT
LGEIEGRLMDLLKTSVAGRA

Nucleotide

• Length: 1023 bp

>NTDB_id=85266 GSVR_RS19150 WP_173195406.1 4081398..4082420(-) (recA) [Geobacter sp. SVR]
ATGTCGGAGAAAAACACCTCGCCAGAAAGAAACAAGGCCATTGACCTTGCCCTGAGCCAGATCGAGAAACAGTTCGGCAA
GGGCGCCATCATGCGGCTGGGCAACGATGAGGTGCTGCCCGGCGTGGAGGCGGTTTCCACCGGTTCGATTTCCCTCGATA
TGGCGCTGGGGGTGGGGGGAGTGCCCCGCGGCAGGATCGTGGAGATATACGGGCCGGAATCCTCCGGTAAGACTACGCTG
GCGCTGCACGTCGTGGCCGAGGCCCAGAAGCTGGGGGGCATTGCGGCATTCGTCGACGCCGAGCATGCCCTGGATATCGG
CTATGCCCGCAAGCTGGGGGTAAAGACCGACGATCTGCTGGTGTCGCAGCCCGATACCGGCGAACAGGCCCTGGAGATCG
CCGAGACGCTGGTGCGCAGCGGCGCCATTGACGTGCTGGTGGTGGACTCCGTGGCGGCCCTGGTGCCCAAGGCCGAAATC
GAAGGTGAGATGGGTGACTCGCACATGGGTCTGCAGGCCCGGCTCATGTCCCAGGCGCTGCGCAAGCTGACCGGGATCAT
CTCCAAGTCCAACTGCTGCGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCGGAAACCA
CCACGGGGGGTAACGCGCTCAAATTCTACGCCTCGGTCCGCATGGACATCCGCAAGATCGCCACGCTCAAGCAGGGGGAT
GCCGTGATCGGCTCCCGCACCCGCGTCAAGGTGGTCAAGAACAAGGTGGCTCCCCCCTTCCGCGAAGTGGAGTTCGACAT
TCTCTATGGCGAGGGCATCTCCCGTACCGGAGACGTGCTCGATCTGGCGGTGGAAAAGGGCATCATCGAGAAGAGCGGGG
CCTGGTATTCCTACGGCAAGGAGCGTATCGGCCAGGGGCGTGAGAATTCCCGTACCTGGCTGTCCGAGCACCCGGATACC
CTGGGCGAAATCGAAGGCAGGCTGATGGATCTGCTCAAAACATCCGTGGCAGGCAGGGCTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (12-274)

3D structure

• AlphaFold DB: A0A6F9WRL8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.698	93.529	0.671
recA	Acinetobacter baylyi ADP1	68.598	96.471	0.662
recA	Glaesserella parasuis strain SC1401	67.568	97.941	0.662
recA	Pseudomonas stutzeri DSM 10701	67.771	97.647	0.662
recA	Neisseria gonorrhoeae MS11	68	95.588	0.65
recA	Neisseria gonorrhoeae MS11	68	95.588	0.65
recA	Neisseria gonorrhoeae strain FA1090	68	95.588	0.65
recA	Acinetobacter baumannii D1279779	67.485	95.882	0.647
recA	Latilactobacillus sakei subsp. sakei 23K	67.722	92.941	0.629
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.545	97.059	0.626
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.089	92.941	0.624
recA	Bacillus subtilis subsp. subtilis str. 168	67.093	92.059	0.618
recA	Helicobacter pylori strain NCTC11637	66.246	93.235	0.618
recA	Vibrio cholerae strain A1552	65.015	95	0.618
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.015	95	0.618
recA	Helicobacter pylori 26695	65.931	93.235	0.615
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.355	99.412	0.6
recA	Streptococcus pneumoniae Rx1	61.398	96.765	0.594
recA	Streptococcus pneumoniae D39	61.398	96.765	0.594
recA	Streptococcus pneumoniae R6	61.398	96.765	0.594
recA	Streptococcus pyogenes NZ131	61.398	96.765	0.594
recA	Streptococcus pneumoniae TIGR4	61.398	96.765	0.594
recA	Streptococcus mutans UA159	61.398	96.765	0.594
recA	Streptococcus mitis NCTC 12261	61.094	96.765	0.591
recA	Lactococcus lactis subsp. cremoris KW2	61.094	96.765	0.591
recA	Streptococcus mitis SK321	61.094	96.765	0.591