Detailed information NTG0832473

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: U0450_RS07735
• Genome accession: NZ_CP139863
• Coordinates: 1506312..1507583 (-)
• Length: 423 a.a.
• NCBI ID: WP_001113222.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 15P2112
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1501312..1512583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0450_RS07715	-	1501903..1502793 (+)	891	WP_000797961.1	carbohydrate ABC transporter permease	-
U0450_RS07720	-	1502822..1504438 (+)	1617	WP_000669747.1	ABC transporter substrate-binding protein	-
U0450_RS07725	-	1504448..1505767 (+)	1320	WP_050233565.1	glycoside hydrolase family 32 protein	-
U0450_RS07735	rarA	1506312..1507583 (-)	1272	WP_001113222.1	replication-associated recombination protein A	Machinery gene
U0450_RS07740	-	1507853..1508092 (+)	240	WP_000818078.1	hypothetical protein	-
U0450_RS07745	-	1508257..1508436 (+)	180	WP_001809903.1	hypothetical protein	-
U0450_RS07750	-	1508573..1508752 (+)	180	WP_001132284.1	type II toxin-antitoxin system HicA family toxin	-
U0450_RS07755	-	1508789..1509241 (+)	453	Protein_1482	type II toxin-antitoxin system HicB family antitoxin	-
U0450_RS07760	-	1509532..1510002 (+)	471	WP_000257106.1	DUF3013 family protein	-
U0450_RS07765	-	1510021..1511124 (+)	1104	WP_000719717.1	site-2 protease family protein	-
U0450_RS07770	-	1511090..1511518 (+)	429	WP_000418176.1	NUDIX hydrolase	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 46968.44 Da
• Isoelectric Point: 6.0996

>NTDB_id=832473 U0450_RS07735 WP_001113222.1 1506312..1507583(-) (rarA) [Streptococcus pneumoniae strain 15P2112]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFNFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQKIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDRLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=832473 U0450_RS07735 WP_001113222.1 1506312..1507583(-) (rarA) [Streptococcus pneumoniae strain 15P2112]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCTGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTTTCCG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTTGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTAATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTCTCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATCCGTGGCTCAGATGTGGATGCCAGTCTCCACTATGCTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGTTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCCCAGAAGATTGGGTTCCCAGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTACGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTCAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCGTTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	57.518	99.054	0.57