Detailed information NTG0082477

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: M2Y57_RS06450
• Genome accession: NZ_AP023345
• Coordinates: 1358617..1359660 (-)
• Length: 347 a.a.
• NCBI ID: WP_000963126.1
• Uniprot ID: K7Y3C2
• Organism: Helicobacter pylori strain JSHR31
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1353617..1364660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2Y57_RS06420 (JSHR31_12710)	-	1353858..1354970 (+)	1113	WP_248425814.1	glycosyltransferase family 8 protein	-
M2Y57_RS06425 (JSHR31_12720)	-	1354974..1355930 (-)	957	WP_000952281.1	PDC sensor domain-containing protein	-
M2Y57_RS06430 (JSHR31_12730)	-	1355952..1356440 (-)	489	WP_001216267.1	shikimate kinase	-
M2Y57_RS06435 (JSHR31_12740)	-	1356445..1357041 (-)	597	WP_248425815.1	AMIN domain-containing protein	-
M2Y57_RS06440 (JSHR31_12750)	-	1357057..1357332 (-)	276	WP_154469713.1	hypothetical protein	-
M2Y57_RS06445 (JSHR31_12760)	eno	1357325..1358605 (-)	1281	WP_000955622.1	phosphopyruvate hydratase	-
M2Y57_RS06450 (JSHR31_12770)	recA	1358617..1359660 (-)	1044	WP_000963126.1	recombinase RecA	Machinery gene
M2Y57_RS06455 (JSHR31_12780)	-	1359759..1360625 (+)	867	WP_248425817.1	menaquinone biosynthesis family protein	-
M2Y57_RS06460 (JSHR31_12790)	-	1360622..1361389 (-)	768	WP_248425819.1	hypothetical protein	-
M2Y57_RS06465 (JSHR31_12800)	-	1361477..1362058 (-)	582	WP_180433559.1	hypothetical protein	-
M2Y57_RS06470 (JSHR31_12810)	-	1362071..1362655 (-)	585	WP_001222002.1	hypothetical protein	-
M2Y57_RS06475 (JSHR31_12820)	-	1362756..1362962 (-)	207	WP_015645501.1	DUF4006 family protein	-
M2Y57_RS06480 (JSHR31_12830)	ccoP	1362973..1363851 (-)	879	WP_248425820.1	cytochrome-c oxidase, cbb3-type subunit III	-
M2Y57_RS06485 (JSHR31_12840)	-	1363853..1364071 (-)	219	WP_001868213.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37669.40 Da
• Isoelectric Point: 5.7176

>NTDB_id=82477 M2Y57_RS06450 WP_000963126.1 1358617..1359660(-) (recA) [Helicobacter pylori strain JSHR31]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=82477 M2Y57_RS06450 WP_000963126.1 1358617..1359660(-) (recA) [Helicobacter pylori strain JSHR31]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGCAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAATGGTGGCGTGTGCGCGTTTATTGACGCTGAGCATGCCTTAGATGTGCATTATGCTAAGAG
GTTGGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CAAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCAGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTTTTGCACAAGATGAA
CACTACTCTCATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCCTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GCTACCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAGGCCTTACTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

3D structure

• AlphaFold DB: K7Y3C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori 26695	99.424	100	0.994
recA	Helicobacter pylori strain NCTC11637	99.424	100	0.994
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	78.963	94.524	0.746
recA	Neisseria gonorrhoeae MS11	66.462	93.66	0.622
recA	Neisseria gonorrhoeae MS11	66.462	93.66	0.622
recA	Neisseria gonorrhoeae strain FA1090	66.462	93.66	0.622
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.458	95.677	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.231	93.66	0.611
recA	Acinetobacter baumannii D1279779	63.914	94.236	0.602
recA	Acinetobacter baylyi ADP1	63.609	94.236	0.599
recA	Ralstonia pseudosolanacearum GMI1000	61.905	96.83	0.599
recA	Pseudomonas stutzeri DSM 10701	60.526	98.559	0.597
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.31	96.83	0.594
recA	Vibrio cholerae strain A1552	61.31	96.83	0.594
recA	Glaesserella parasuis strain SC1401	60.671	94.524	0.573
recA	Streptococcus pneumoniae Rx1	55.84	100	0.565
recA	Streptococcus pneumoniae D39	55.84	100	0.565
recA	Streptococcus pneumoniae R6	55.84	100	0.565
recA	Streptococcus pneumoniae TIGR4	55.84	100	0.565
recA	Latilactobacillus sakei subsp. sakei 23K	54.622	100	0.562
recA	Streptococcus pyogenes NZ131	57.576	95.101	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.751	94.813	0.548
recA	Streptococcus mitis SK321	57.447	94.813	0.545
recA	Streptococcus mitis NCTC 12261	57.447	94.813	0.545
recA	Streptococcus mutans UA159	55.988	96.254	0.539
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.442	93.948	0.53