Detailed information NTG0797084

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: RA106_RS06785
• Genome accession: NZ_CP132900
• Coordinates: 1311607..1312692 (-)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: Q5M3H6
• Organism: Streptococcus thermophilus strain CICC 20372
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1306607..1317692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA106_RS06755 (RA106_06750)	-	1306971..1307786 (-)	816	WP_011226298.1	Cof-type HAD-IIB family hydrolase	-
RA106_RS06760 (RA106_06755)	-	1307779..1308573 (-)	795	WP_011681412.1	HAD-IIB family hydrolase	-
RA106_RS06765 (RA106_06760)	-	1308758..1309135 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
RA106_RS06770 (RA106_06765)	-	1309140..1309838 (+)	699	WP_023909821.1	ABC transporter ATP-binding protein	-
RA106_RS06775 (RA106_06770)	-	1309850..1310635 (+)	786	WP_002951425.1	hypothetical protein	-
RA106_RS06780 (RA106_06775)	-	1310685..1311614 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	-
RA106_RS06785 (RA106_06780)	amiE	1311607..1312692 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
RA106_RS06790 (RA106_06785)	amiD	1312702..1313628 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
RA106_RS06795 (RA106_06790)	amiC	1313628..1315121 (-)	1494	WP_011681416.1	ABC transporter permease	Regulator
RA106_RS06800 (RA106_06795)	amiA	1315183..1317150 (-)	1968	WP_024703940.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=797084 RA106_RS06785 WP_011226304.1 1311607..1312692(-) (amiE) [Streptococcus thermophilus strain CICC 20372]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=797084 RA106_RS06785 WP_011226304.1 1311607..1312692(-) (amiE) [Streptococcus thermophilus strain CICC 20372]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

3D structure

• AlphaFold DB: Q5M3H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526