Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PYH70_RS07370 | Genome accession | NZ_CP118789 |
| Coordinates | 1520683..1521729 (-) | Length | 348 a.a. |
| NCBI ID | WP_002451246.1 | Uniprot ID | A0A2T4Q2T6 |
| Organism | Staphylococcus warneri strain 7068 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1517847..1591806 | 1520683..1521729 | within | 0 |
Gene organization within MGE regions
Location: 1517847..1591806
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PYH70_RS07360 (PYH70_07360) | - | 1518328..1518543 (+) | 216 | WP_002467042.1 | hypothetical protein | - |
| PYH70_RS07365 (PYH70_07365) | rny | 1518665..1520224 (-) | 1560 | WP_015365062.1 | ribonuclease Y | - |
| PYH70_RS07370 (PYH70_07370) | recA | 1520683..1521729 (-) | 1047 | WP_002451246.1 | recombinase RecA | Machinery gene |
| PYH70_RS07375 (PYH70_07375) | - | 1521896..1523047 (-) | 1152 | WP_002465812.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| PYH70_RS07380 (PYH70_07380) | pgsA | 1523220..1523795 (-) | 576 | WP_002465809.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PYH70_RS07385 (PYH70_07385) | - | 1523826..1524218 (-) | 393 | WP_002465806.1 | helix-turn-helix domain-containing protein | - |
| PYH70_RS07390 (PYH70_07390) | - | 1524239..1525075 (-) | 837 | WP_015365064.1 | YmfK family protein | - |
| PYH70_RS07395 (PYH70_07395) | - | 1525210..1525914 (-) | 705 | WP_002465810.1 | SDR family oxidoreductase | - |
| PYH70_RS07400 (PYH70_07400) | - | 1525911..1527200 (-) | 1290 | WP_015365066.1 | pitrilysin family protein | - |
| PYH70_RS07405 (PYH70_07405) | - | 1527200..1528471 (-) | 1272 | WP_002465808.1 | pitrilysin family protein | - |
| PYH70_RS07410 (PYH70_07410) | - | 1528499..1529212 (-) | 714 | WP_015365067.1 | GntR family transcriptional regulator | - |
| PYH70_RS07415 (PYH70_07415) | - | 1529215..1531611 (-) | 2397 | WP_002466061.1 | DNA translocase FtsK | - |
| PYH70_RS07420 (PYH70_07420) | - | 1531851..1533524 (-) | 1674 | WP_337225713.1 | ribonuclease J | - |
| PYH70_RS07425 (PYH70_07425) | pnp | 1533711..1535810 (-) | 2100 | WP_002466036.1 | polyribonucleotide nucleotidyltransferase | - |
| PYH70_RS07430 (PYH70_07430) | rpsO | 1535946..1536215 (-) | 270 | WP_002450539.1 | 30S ribosomal protein S15 | - |
| PYH70_RS07435 (PYH70_07435) | ribF | 1536329..1537300 (-) | 972 | WP_002466033.1 | riboflavin biosynthesis protein RibF | - |
| PYH70_RS07440 (PYH70_07440) | truB | 1537313..1538230 (-) | 918 | WP_002466042.1 | tRNA pseudouridine(55) synthase TruB | - |
| PYH70_RS07445 (PYH70_07445) | rbfA | 1538383..1538733 (-) | 351 | WP_002466047.1 | 30S ribosome-binding factor RbfA | - |
| PYH70_RS07450 (PYH70_07450) | infB | 1538873..1541038 (-) | 2166 | WP_353422344.1 | translation initiation factor IF-2 | - |
| PYH70_RS07455 (PYH70_07455) | - | 1541043..1541360 (-) | 318 | WP_002466040.1 | ribosomal L7Ae/L30e/S12e/Gadd45 family protein | - |
| PYH70_RS07460 (PYH70_07460) | - | 1541357..1541653 (-) | 297 | WP_151359904.1 | YlxR family RNase P modulator | - |
| PYH70_RS07465 (PYH70_07465) | nusA | 1541663..1542895 (-) | 1233 | WP_015365073.1 | transcription termination factor NusA | - |
| PYH70_RS07470 (PYH70_07470) | rimP | 1542916..1543383 (-) | 468 | WP_002466062.1 | ribosome maturation factor RimP | - |
| PYH70_RS07475 (PYH70_07475) | - | 1543566..1547876 (-) | 4311 | WP_103286318.1 | PolC-type DNA polymerase III | - |
| PYH70_RS07480 (PYH70_07480) | - | 1548144..1549847 (-) | 1704 | WP_002466052.1 | proline--tRNA ligase | - |
| PYH70_RS07485 (PYH70_07485) | rseP | 1549867..1551153 (-) | 1287 | WP_002466035.1 | RIP metalloprotease RseP | - |
| PYH70_RS07490 (PYH70_07490) | - | 1551396..1552178 (-) | 783 | WP_002466065.1 | phosphatidate cytidylyltransferase | - |
| PYH70_RS07495 (PYH70_07495) | - | 1552182..1552952 (-) | 771 | WP_002466060.1 | isoprenyl transferase | - |
| PYH70_RS07500 (PYH70_07500) | frr | 1553185..1553739 (-) | 555 | WP_002450553.1 | ribosome recycling factor | - |
| PYH70_RS07505 (PYH70_07505) | pyrH | 1553755..1554477 (-) | 723 | WP_002450554.1 | UMP kinase | - |
| PYH70_RS07510 (PYH70_07510) | tsf | 1554618..1555496 (-) | 879 | WP_002466038.1 | translation elongation factor Ts | - |
| PYH70_RS07515 (PYH70_07515) | rpsB | 1555648..1556436 (-) | 789 | WP_002466032.1 | 30S ribosomal protein S2 | - |
| PYH70_RS07520 (PYH70_07520) | codY | 1556743..1557516 (-) | 774 | WP_002450557.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| PYH70_RS07525 (PYH70_07525) | hslU | 1557540..1558943 (-) | 1404 | WP_002466051.1 | ATP-dependent protease ATPase subunit HslU | - |
| PYH70_RS07530 (PYH70_07530) | hslV | 1559032..1559577 (-) | 546 | WP_002450559.1 | ATP-dependent protease subunit HslV | - |
| PYH70_RS07535 (PYH70_07535) | xerC | 1559574..1560467 (-) | 894 | WP_002466041.1 | tyrosine recombinase XerC | - |
| PYH70_RS07540 (PYH70_07540) | trmFO | 1560632..1561939 (-) | 1308 | WP_002466058.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| PYH70_RS07545 (PYH70_07545) | topA | 1562056..1564131 (-) | 2076 | WP_026088907.1 | type I DNA topoisomerase | - |
| PYH70_RS07550 (PYH70_07550) | dprA | 1564309..1565177 (-) | 869 | Protein_1449 | DNA-processing protein DprA | - |
| PYH70_RS07555 (PYH70_07555) | sucD | 1565418..1566323 (-) | 906 | WP_002466045.1 | succinate--CoA ligase subunit alpha | - |
| PYH70_RS07560 (PYH70_07560) | sucC | 1566345..1567511 (-) | 1167 | WP_002466034.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| PYH70_RS07565 (PYH70_07565) | - | 1567619..1568389 (-) | 771 | WP_002466053.1 | ribonuclease HII | - |
| PYH70_RS07570 (PYH70_07570) | ylqF | 1568382..1569257 (-) | 876 | WP_002466050.1 | ribosome biogenesis GTPase YlqF | - |
| PYH70_RS07575 (PYH70_07575) | - | 1569557..1572157 (+) | 2601 | WP_337225712.1 | YfhO family protein | - |
| PYH70_RS07580 (PYH70_07580) | - | 1572150..1574759 (+) | 2610 | WP_002466046.1 | YfhO family protein | - |
| PYH70_RS07585 (PYH70_07585) | rplS | 1574925..1575275 (-) | 351 | WP_002466049.1 | 50S ribosomal protein L19 | - |
| PYH70_RS07590 (PYH70_07590) | trmD | 1575381..1576118 (-) | 738 | WP_107569494.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| PYH70_RS07595 (PYH70_07595) | rimM | 1576118..1576621 (-) | 504 | WP_353422345.1 | ribosome maturation factor RimM | - |
| PYH70_RS07600 (PYH70_07600) | rpsP | 1576789..1577064 (-) | 276 | WP_002466054.1 | 30S ribosomal protein S16 | - |
| PYH70_RS07605 (PYH70_07605) | ffh | 1577596..1578963 (-) | 1368 | WP_353422346.1 | signal recognition particle protein | - |
| PYH70_RS07610 (PYH70_07610) | - | 1578988..1579320 (-) | 333 | WP_002466066.1 | putative DNA-binding protein | - |
| PYH70_RS07615 (PYH70_07615) | ftsY | 1579307..1580551 (-) | 1245 | WP_353422347.1 | signal recognition particle-docking protein FtsY | - |
| PYH70_RS07620 (PYH70_07620) | smc | 1580548..1584117 (-) | 3570 | WP_015365084.1 | chromosome segregation protein SMC | - |
| PYH70_RS07625 (PYH70_07625) | rnc | 1584270..1584998 (-) | 729 | WP_015365085.1 | ribonuclease III | - |
| PYH70_RS07630 (PYH70_07630) | - | 1585109..1585342 (-) | 234 | WP_001830184.1 | acyl carrier protein | - |
| PYH70_RS07635 (PYH70_07635) | fabG | 1585555..1586289 (-) | 735 | WP_015365086.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| PYH70_RS07640 (PYH70_07640) | fabD | 1586289..1587209 (-) | 921 | WP_002466912.1 | ACP S-malonyltransferase | - |
| PYH70_RS07645 (PYH70_07645) | plsX | 1587202..1588188 (-) | 987 | WP_015365088.1 | phosphate acyltransferase PlsX | - |
| PYH70_RS07650 (PYH70_07650) | fapR | 1588181..1588750 (-) | 570 | WP_002466907.1 | transcription factor FapR | - |
| PYH70_RS07655 (PYH70_07655) | recG | 1588900..1590948 (-) | 2049 | WP_002466919.1 | ATP-dependent DNA helicase RecG | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37828.74 Da Isoelectric Point: 5.0133
>NTDB_id=795295 PYH70_RS07370 WP_002451246.1 1520683..1521729(-) (recA) [Staphylococcus warneri strain 7068]
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
ETQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENEIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDQ
KLREKLGIFDGDVEEKEEDAPKSLFDEE
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
ETQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENEIVDKSGAWYSYNGERMGQGKENVKTYLKENPQIKDEIDQ
KLREKLGIFDGDVEEKEEDAPKSLFDEE
Nucleotide
Download Length: 1047 bp
>NTDB_id=795295 PYH70_RS07370 WP_002451246.1 1520683..1521729(-) (recA) [Staphylococcus warneri strain 7068]
TTGGATAACGAACGTCAAAAAGCTCTCGATACAGTAATAAAAAATATGGAAAAATCATTTGGTAAAGGTGCAGTAATGAA
ATTAGGCGATAATAAAGGTCGCAGAGTTTCAAGTACATCAAGTGGTTCAGTTACATTAGATAACGCATTAGGTGTAGGTG
GCTATCCTAAAGGAAGAATTATTGAAATATATGGACCAGAAAGTTCTGGTAAAACTACAGTTGCATTACACGCTATTGCA
GAAACACAAAAAAACGGTGGCGTTGCTGCATTTATTGATGCTGAGCATGCATTAGATCCTGTTTATGCTCAAGCACTAGG
TGTAGATATTGATAATCTATATTTATCACAACCTGATCATGGGGAACAAGGTTTAGAGATTGCTGAAGCTTTTGTTCGTA
GTGGTGCAGTCGATATCGTAGTAGTCGATTCAGTAGCTGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTGCAAGCAAGATTAATGTCACAAGCATTACGTAAACTATCTGGAGCTATTTCCAAATCAAATACGAC
TGCCATCTTCATTAACCAAATTCGTGAAAAAGTAGGTGTGATGTTCGGTAACCCTGAAACAACACCAGGCGGTAGAGCAT
TAAAATTCTATAGTTCTGTTCGTTTAGAAGTTCGTCGTGCTGAACAATTGAAACAAGGACAAGAGATTGTTGGTAATAGA
ACTAAGATTAAAGTAGTTAAAAACAAAGTTGCACCACCATTCAGAGTTGCAGAAGTTGATATCATGTATGGTCAAGGTAT
CTCTAAAGAAGGCGAACTGATTGATCTTGGTGTTGAAAATGAAATCGTTGATAAATCTGGAGCTTGGTATTCATATAATG
GTGAAAGAATGGGACAAGGTAAAGAAAACGTTAAAACTTACCTTAAAGAAAATCCTCAAATTAAAGATGAAATCGATCAA
AAACTACGTGAGAAGCTCGGTATTTTTGATGGTGATGTAGAAGAAAAAGAAGAAGACGCACCGAAGTCATTATTTGATGA
AGAATAA
TTGGATAACGAACGTCAAAAAGCTCTCGATACAGTAATAAAAAATATGGAAAAATCATTTGGTAAAGGTGCAGTAATGAA
ATTAGGCGATAATAAAGGTCGCAGAGTTTCAAGTACATCAAGTGGTTCAGTTACATTAGATAACGCATTAGGTGTAGGTG
GCTATCCTAAAGGAAGAATTATTGAAATATATGGACCAGAAAGTTCTGGTAAAACTACAGTTGCATTACACGCTATTGCA
GAAACACAAAAAAACGGTGGCGTTGCTGCATTTATTGATGCTGAGCATGCATTAGATCCTGTTTATGCTCAAGCACTAGG
TGTAGATATTGATAATCTATATTTATCACAACCTGATCATGGGGAACAAGGTTTAGAGATTGCTGAAGCTTTTGTTCGTA
GTGGTGCAGTCGATATCGTAGTAGTCGATTCAGTAGCTGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTGCAAGCAAGATTAATGTCACAAGCATTACGTAAACTATCTGGAGCTATTTCCAAATCAAATACGAC
TGCCATCTTCATTAACCAAATTCGTGAAAAAGTAGGTGTGATGTTCGGTAACCCTGAAACAACACCAGGCGGTAGAGCAT
TAAAATTCTATAGTTCTGTTCGTTTAGAAGTTCGTCGTGCTGAACAATTGAAACAAGGACAAGAGATTGTTGGTAATAGA
ACTAAGATTAAAGTAGTTAAAAACAAAGTTGCACCACCATTCAGAGTTGCAGAAGTTGATATCATGTATGGTCAAGGTAT
CTCTAAAGAAGGCGAACTGATTGATCTTGGTGTTGAAAATGAAATCGTTGATAAATCTGGAGCTTGGTATTCATATAATG
GTGAAAGAATGGGACAAGGTAAAGAAAACGTTAAAACTTACCTTAAAGAAAATCCTCAAATTAAAGATGAAATCGATCAA
AAACTACGTGAGAAGCTCGGTATTTTTGATGGTGATGTAGAAGAAAAAGAAGAAGACGCACCGAAGTCATTATTTGATGA
AGAATAA
Similar proteins
Only experimentally validated proteins are listed.