Detailed information NTG0079139

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: HMP06_RS05650
• Genome accession: NZ_AP022672
• Coordinates: 1114281..1115354 (-)
• Length: 357 a.a.
• NCBI ID: WP_176496220.1
• Uniprot ID: -
• Organism: Sphingomonas sp. HMP6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1109281..1120354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMP06_RS05630 (HMP06_1115)	-	1109776..1110495 (-)	720	WP_232089875.1	phytanoyl-CoA dioxygenase family protein	-
HMP06_RS05635 (HMP06_1116)	-	1110450..1111703 (-)	1254	WP_176496217.1	Xaa-Pro peptidase family protein	-
HMP06_RS05640 (HMP06_1117)	-	1111821..1113149 (+)	1329	WP_176496218.1	dicarboxylate/amino acid:cation symporter	-
HMP06_RS05645 (HMP06_1118)	-	1113338..1113970 (-)	633	WP_176496219.1	glutathione S-transferase	-
HMP06_RS05650 (HMP06_1119)	recA	1114281..1115354 (-)	1074	WP_176496220.1	recombinase RecA	Machinery gene
HMP06_RS05655 (HMP06_1120)	-	1115506..1115859 (-)	354	WP_176496221.1	response regulator	-
HMP06_RS05660 (HMP06_1121)	-	1115897..1118320 (-)	2424	WP_176496222.1	response regulator	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38430.96 Da
• Isoelectric Point: 5.5669

>NTDB_id=79139 HMP06_RS05650 WP_176496220.1 1114281..1115354(-) (recA) [Sphingomonas sp. HMP6]
MAASTDKAAEKAKDERAKALEAALAQIDRAFGKGSAMKLGSKQTMQVEVISTGSLGLDIALGVGGLPRGRVIEIYGPESS
GKTTLALHVIAEAQKTGGTAAFVDAEHALDPVYAKKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAALV
PRAEIEGEMGDSHVGLQARLMSQSLRKLTGSISRSRCMVIFINQLRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQ
IKDRDEIIGNTTRVKVVKNKVAPPFKQVEFDIMYGQGVSKIGEILDLGVKAGLVEKSGAWFSYDSVRIGQGRENSKTFLK
EHPEMSDRLEAAIRSRTDKVAEEMMAGPEPDEGDEEL

Nucleotide

• Length: 1074 bp

>NTDB_id=79139 HMP06_RS05650 WP_176496220.1 1114281..1115354(-) (recA) [Sphingomonas sp. HMP6]
ATGGCAGCATCCACGGACAAGGCCGCCGAAAAGGCCAAGGACGAACGGGCGAAGGCGCTCGAGGCCGCTCTGGCTCAGAT
CGACCGCGCATTCGGCAAGGGCTCGGCAATGAAGTTGGGCTCGAAGCAGACGATGCAGGTCGAGGTGATCTCGACCGGCT
CGCTCGGGCTCGACATCGCACTCGGGGTGGGCGGTTTGCCACGCGGGCGTGTGATTGAAATTTACGGGCCGGAATCCTCG
GGTAAGACGACCCTCGCTCTGCATGTGATCGCTGAGGCGCAAAAGACCGGCGGCACCGCTGCCTTCGTCGATGCCGAACA
CGCGCTTGATCCGGTTTACGCCAAGAAGCTCGGCGTCAACATCGACGAACTGATCGTGTCGCAGCCCGACACCGGCGAGC
AGGCGCTCGAGATCGTCGATACGCTGGTACGCTCGAACGCGATCGATGTGCTGGTGGTCGATTCGGTCGCGGCGCTGGTC
CCGCGCGCGGAAATCGAGGGCGAGATGGGCGACAGCCACGTCGGCCTGCAAGCACGCCTTATGTCGCAATCCTTGCGCAA
GCTGACCGGCTCGATCAGCCGTTCGCGCTGCATGGTGATCTTCATCAACCAGCTCCGCATGAAGATCGGCGTGATGTATG
GCAACCCGGAGACGACGACGGGCGGCAATGCGCTGAAATTCTATGCTTCGGTGCGCCTCGACATCCGGCGCACCGGACAG
ATCAAGGATCGCGACGAGATCATCGGCAACACGACGCGCGTCAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCAAGCA
AGTCGAATTCGACATCATGTATGGTCAGGGCGTCTCCAAGATCGGTGAAATCCTCGATCTCGGCGTCAAGGCCGGGCTCG
TCGAGAAATCGGGTGCATGGTTTTCCTATGACAGCGTCCGTATTGGCCAAGGCCGCGAGAATTCGAAGACGTTCCTGAAA
GAGCATCCCGAAATGTCGGATCGGCTGGAAGCGGCGATCCGGTCGCGGACCGACAAGGTAGCCGAGGAAATGATGGCCGG
CCCCGAGCCGGACGAGGGCGACGAAGAGTTGTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	67.56	94.118	0.636
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.56	94.118	0.636
recA	Glaesserella parasuis strain SC1401	66.082	95.798	0.633
recA	Neisseria gonorrhoeae MS11	69.969	90.476	0.633
recA	Neisseria gonorrhoeae MS11	69.969	90.476	0.633
recA	Neisseria gonorrhoeae strain FA1090	69.969	90.476	0.633
recA	Acinetobacter baylyi ADP1	65.015	96.078	0.625
recA	Pseudomonas stutzeri DSM 10701	69.04	90.476	0.625
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.723	96.078	0.622
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.565	92.157	0.613
recA	Ralstonia pseudosolanacearum GMI1000	70.455	86.275	0.608
recA	Helicobacter pylori strain NCTC11637	61.739	96.639	0.597
recA	Helicobacter pylori 26695	61.739	96.639	0.597
recA	Acinetobacter baumannii D1279779	65.944	90.476	0.597
recA	Bacillus subtilis subsp. subtilis str. 168	65.625	89.636	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	64.198	90.756	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.19	91.317	0.577
recA	Streptococcus mitis NCTC 12261	58.689	98.319	0.577
recA	Streptococcus mitis SK321	58.405	98.319	0.574
recA	Streptococcus pneumoniae R6	62.577	91.317	0.571
recA	Streptococcus pneumoniae TIGR4	62.577	91.317	0.571
recA	Streptococcus pneumoniae Rx1	62.577	91.317	0.571
recA	Streptococcus pneumoniae D39	62.577	91.317	0.571
recA	Streptococcus pyogenes NZ131	61.027	92.717	0.566
recA	Streptococcus mutans UA159	59.581	93.557	0.557
recA	Lactococcus lactis subsp. cremoris KW2	59.281	93.557	0.555