Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   PUW70_RS09795 Genome accession   NZ_CP118029
Coordinates   1903273..1904418 (-) Length   381 a.a.
NCBI ID   WP_003026640.1    Uniprot ID   A0A2I1UV33
Organism   Streptococcus anginosus strain VSI68     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1898273..1909418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS09755 (PUW70_09755) - 1898735..1899976 (-) 1242 WP_024053215.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  PUW70_RS09760 (PUW70_09760) - 1900177..1900488 (-) 312 WP_003027765.1 DUF1292 domain-containing protein -
  PUW70_RS09765 (PUW70_09765) ruvX 1900506..1900925 (-) 420 WP_003031265.1 Holliday junction resolvase RuvX -
  PUW70_RS09770 (PUW70_09770) - 1900925..1901191 (-) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  PUW70_RS09775 (PUW70_09775) - 1901472..1901609 (-) 138 WP_024053217.1 hypothetical protein -
  PUW70_RS09780 (PUW70_09780) - 1901637..1902029 (-) 393 WP_024053218.1 SP0191 family lipoprotein -
  PUW70_RS09785 (PUW70_09785) - 1902133..1902702 (-) 570 WP_024053219.1 SP0191 family lipoprotein -
  PUW70_RS09790 (PUW70_09790) spx 1902788..1903186 (-) 399 WP_003026638.1 transcriptional regulator Spx -
  PUW70_RS09795 (PUW70_09795) recA 1903273..1904418 (-) 1146 WP_003026640.1 recombinase RecA Machinery gene
  PUW70_RS09800 (PUW70_09800) cinA 1904463..1905734 (-) 1272 WP_070242126.1 competence/damage-inducible protein A Machinery gene
  PUW70_RS09805 (PUW70_09805) - 1906444..1906754 (+) 311 Protein_1888 EamA family transporter -
  PUW70_RS09810 (PUW70_09810) - 1906857..1907435 (-) 579 WP_024053222.1 DNA-3-methyladenine glycosylase I -
  PUW70_RS09815 (PUW70_09815) ruvA 1907446..1908036 (-) 591 WP_024053223.1 Holliday junction branch migration protein RuvA -
  PUW70_RS09820 (PUW70_09820) - 1908198..1908641 (+) 444 WP_024053224.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 381 a.a.        Molecular weight: 41283.91 Da        Isoelectric Point: 4.9241

>NTDB_id=789269 PUW70_RS09795 WP_003026640.1 1903273..1904418(-) (recA) [Streptococcus anginosus strain VSI68]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSTNKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=789269 PUW70_RS09795 WP_003026640.1 1903273..1904418(-) (recA) [Streptococcus anginosus strain VSI68]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGCGAGGAACGTCAAAAAGCGCTAGACACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAGGGAGCAATTATGCGCCTAGGTGAGCGTGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGTTTGGCATTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCGGTGGCGCAGGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTTGATCCAGCTTATGCGCAAGCTCTTGGGGTTAATATTGATGAACTCTTACTTTCTCAACCTGACT
CAGGCGAGCAAGGCCTTGAAATTGCTGGTAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCT
GCCCTCGTACCGCGTGCTGAAATTGACGGAGACATTGGAGATAGCCACGTTGGCTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGTGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTATGGTTTGAT
TGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACCAAATCAACAAACAAAGTAGAGGAAGTCACACTAGATTTGG
ATGACGCGATTGAGATTGAGGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2I1UV33

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.529

100

0.898

  recA Streptococcus pneumoniae Rx1

87.824

100

0.89

  recA Streptococcus pneumoniae R6

87.824

100

0.89

  recA Streptococcus pneumoniae TIGR4

87.824

100

0.89

  recA Streptococcus pneumoniae D39

87.824

100

0.89

  recA Streptococcus mitis SK321

88.451

100

0.885

  recA Streptococcus mutans UA159

86.684

100

0.871

  recA Streptococcus pyogenes NZ131

86.352

100

0.864

  recA Lactococcus lactis subsp. cremoris KW2

78.161

91.339

0.714

  recA Latilactobacillus sakei subsp. sakei 23K

66.022

95.013

0.627

  recA Bacillus subtilis subsp. subtilis str. 168

69.909

86.352

0.604

  recA Neisseria gonorrhoeae strain FA1090

60.405

90.814

0.549

  recA Neisseria gonorrhoeae MS11

60.405

90.814

0.549

  recA Neisseria gonorrhoeae MS11

60.405

90.814

0.549

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.58

85.039

0.541

  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

85.302

0.535

  recA Vibrio cholerae strain A1552

62.769

85.302

0.535

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.094

86.352

0.528

  recA Acinetobacter baumannii D1279779

61.538

85.302

0.525

  recA Glaesserella parasuis strain SC1401

61.231

85.302

0.522

  recA Acinetobacter baylyi ADP1

60.615

85.302

0.517

  recA Helicobacter pylori strain NCTC11637

58.485

86.614

0.507

  recA Helicobacter pylori 26695

58.485

86.614

0.507

  recA Ralstonia pseudosolanacearum GMI1000

60.883

83.202

0.507

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.877

0.504

  recA Pseudomonas stutzeri DSM 10701

58.769

85.302

0.501