Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PSH75_RS06050 | Genome accession | NZ_CP117448 |
| Coordinates | 1339601..1340659 (+) | Length | 352 a.a. |
| NCBI ID | WP_003189042.1 | Uniprot ID | A0A7Y7ZLK5 |
| Organism | Pseudomonas simiae strain FP2084 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1324942..1340659 | 1339601..1340659 | within | 0 |
Gene organization within MGE regions
Location: 1324942..1340659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSH75_RS05935 (PSH75_05935) | - | 1324942..1325430 (-) | 489 | WP_010212724.1 | Panacea domain-containing protein | - |
| PSH75_RS05940 (PSH75_05940) | - | 1325698..1326432 (+) | 735 | WP_010212723.1 | XRE family transcriptional regulator | - |
| PSH75_RS05945 (PSH75_05945) | - | 1327030..1327374 (+) | 345 | WP_021492472.1 | phage holin family protein | - |
| PSH75_RS05950 (PSH75_05950) | - | 1327396..1327911 (+) | 516 | WP_021492471.1 | hypothetical protein | - |
| PSH75_RS05955 (PSH75_05955) | - | 1327915..1328526 (+) | 612 | WP_010212718.1 | phage baseplate assembly protein V | - |
| PSH75_RS05960 (PSH75_05960) | - | 1328536..1328868 (+) | 333 | WP_010212717.1 | phage baseplate protein | - |
| PSH75_RS05965 (PSH75_05965) | - | 1328865..1329860 (+) | 996 | WP_198729787.1 | baseplate J/gp47 family protein | - |
| PSH75_RS05970 (PSH75_05970) | - | 1329857..1330495 (+) | 639 | WP_305469934.1 | phage tail protein I | - |
| PSH75_RS05975 (PSH75_05975) | - | 1330492..1331022 (+) | 531 | WP_106118926.1 | hypothetical protein | - |
| PSH75_RS05980 (PSH75_05980) | - | 1331071..1331853 (+) | 783 | WP_010212713.1 | hypothetical protein | - |
| PSH75_RS05985 (PSH75_05985) | - | 1331855..1332157 (+) | 303 | WP_010212711.1 | hypothetical protein | - |
| PSH75_RS05990 (PSH75_05990) | - | 1332246..1332419 (+) | 174 | WP_021492464.1 | hypothetical protein | - |
| PSH75_RS05995 (PSH75_05995) | - | 1332422..1333588 (+) | 1167 | WP_021492463.1 | tail protein | - |
| PSH75_RS06000 (PSH75_06000) | - | 1333588..1334094 (+) | 507 | WP_010212707.1 | phage major tail tube protein | - |
| PSH75_RS06005 (PSH75_06005) | - | 1334147..1334719 (+) | 573 | WP_010212706.1 | phage tail assembly protein | - |
| PSH75_RS06010 (PSH75_06010) | - | 1334716..1334841 (+) | 126 | WP_010212704.1 | hypothetical protein | - |
| PSH75_RS06015 (PSH75_06015) | - | 1334847..1336307 (+) | 1461 | WP_069672353.1 | tail tape measure protein | - |
| PSH75_RS06020 (PSH75_06020) | - | 1336307..1336690 (+) | 384 | WP_010212701.1 | phage tail protein | - |
| PSH75_RS06025 (PSH75_06025) | - | 1336683..1336895 (+) | 213 | WP_010212700.1 | tail protein X | - |
| PSH75_RS06030 (PSH75_06030) | - | 1336905..1337912 (+) | 1008 | WP_010212698.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PSH75_RS06035 (PSH75_06035) | - | 1337919..1338476 (+) | 558 | WP_010212696.1 | glycoside hydrolase family 19 protein | - |
| PSH75_RS06040 (PSH75_06040) | - | 1338464..1338934 (+) | 471 | WP_029529227.1 | lysis system i-spanin subunit Rz | - |
| PSH75_RS06045 (PSH75_06045) | - | 1339016..1339516 (+) | 501 | WP_010212691.1 | CinA family protein | - |
| PSH75_RS06050 (PSH75_06050) | recA | 1339601..1340659 (+) | 1059 | WP_003189042.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37580.12 Da Isoelectric Point: 5.3036
>NTDB_id=785359 PSH75_RS06050 WP_003189042.1 1339601..1340659(+) (recA) [Pseudomonas simiae strain FP2084]
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
Nucleotide
Download Length: 1059 bp
>NTDB_id=785359 PSH75_RS06050 WP_003189042.1 1339601..1340659(+) (recA) [Pseudomonas simiae strain FP2084]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTCATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCTGAATACGCCGGCAAACTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCAGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTGCCTAAGGCTGAAATCGAAGGCGAAATGGGTGAT
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAAGAAGGTGACGAGGTTGTGGGTAGCGAA
ACCCGCGTCAAAGTCGTGAAGAACAAAGTGGCTCCGCCTTTCCGTCAGGCCGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATCGACCTGGGCGTGTTGCACGGTTTCGTCGAGAAATCGGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGCCAAGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGACATTGCTGCCACACTTGAAAAG
CAGATTCGCGACAAGCTGCTGACCGCCGCTCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGATACTGACATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTCATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCTGAATACGCCGGCAAACTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCAGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTGCCTAAGGCTGAAATCGAAGGCGAAATGGGTGAT
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAAGAAGGTGACGAGGTTGTGGGTAGCGAA
ACCCGCGTCAAAGTCGTGAAGAACAAAGTGGCTCCGCCTTTCCGTCAGGCCGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATCGACCTGGGCGTGTTGCACGGTTTCGTCGAGAAATCGGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGCCAAGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGACATTGCTGCCACACTTGAAAAG
CAGATTCGCGACAAGCTGCTGACCGCCGCTCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGATACTGACATCTGA
Similar proteins
Only experimentally validated proteins are listed.