Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PSH76_RS21655 | Genome accession | NZ_CP117447 |
| Coordinates | 4763263..4764321 (-) | Length | 352 a.a. |
| NCBI ID | WP_003189042.1 | Uniprot ID | A0A7Y7ZLK5 |
| Organism | Pseudomonas sp. FP215 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4762787..4779476 | 4763263..4764321 | within | 0 |
Gene organization within MGE regions
Location: 4762787..4779476
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSH76_RS21650 (PSH76_21640) | recX | 4762787..4763254 (-) | 468 | WP_003189043.1 | recombination regulator RecX | - |
| PSH76_RS21655 (PSH76_21645) | recA | 4763263..4764321 (-) | 1059 | WP_003189042.1 | recombinase RecA | Machinery gene |
| PSH76_RS21660 (PSH76_21650) | - | 4764405..4764905 (-) | 501 | WP_020301157.1 | CinA family protein | - |
| PSH76_RS21665 (PSH76_21655) | - | 4765058..4765615 (-) | 558 | WP_305492891.1 | glycoside hydrolase family 19 protein | - |
| PSH76_RS21670 (PSH76_21660) | - | 4765638..4766639 (-) | 1002 | WP_305492892.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PSH76_RS21675 (PSH76_21665) | - | 4766649..4766861 (-) | 213 | WP_044272200.1 | tail protein X | - |
| PSH76_RS21680 (PSH76_21670) | - | 4766854..4767237 (-) | 384 | WP_278916289.1 | phage tail protein | - |
| PSH76_RS21685 (PSH76_21675) | - | 4767237..4769468 (-) | 2232 | WP_305492893.1 | phage tail tape measure protein | - |
| PSH76_RS21690 (PSH76_21680) | - | 4769597..4770178 (-) | 582 | WP_305492894.1 | phage tail assembly protein | - |
| PSH76_RS21695 (PSH76_21685) | - | 4770360..4770866 (-) | 507 | WP_305492895.1 | phage major tail tube protein | - |
| PSH76_RS21700 (PSH76_21690) | - | 4770866..4772032 (-) | 1167 | WP_032877508.1 | tail protein | - |
| PSH76_RS21705 (PSH76_21695) | - | 4772035..4772208 (-) | 174 | WP_003189022.1 | hypothetical protein | - |
| PSH76_RS21710 (PSH76_21700) | - | 4772297..4772599 (-) | 303 | WP_082239702.1 | hypothetical protein | - |
| PSH76_RS21715 (PSH76_21705) | - | 4772611..4773393 (-) | 783 | WP_278916278.1 | phage tail protein | - |
| PSH76_RS21720 (PSH76_21710) | - | 4773441..4773971 (-) | 531 | WP_032893292.1 | tail fiber protein | - |
| PSH76_RS21725 (PSH76_21715) | - | 4773968..4774606 (-) | 639 | WP_305492896.1 | phage tail protein I | - |
| PSH76_RS21730 (PSH76_21720) | - | 4774603..4775598 (-) | 996 | WP_098949399.1 | baseplate J/gp47 family protein | - |
| PSH76_RS21735 (PSH76_21725) | - | 4775595..4775927 (-) | 333 | WP_032893295.1 | phage baseplate protein | - |
| PSH76_RS21740 (PSH76_21730) | - | 4775937..4776548 (-) | 612 | WP_032893296.1 | phage baseplate assembly protein V | - |
| PSH76_RS21745 (PSH76_21735) | - | 4776552..4777067 (-) | 516 | WP_032893297.1 | hypothetical protein | - |
| PSH76_RS21750 (PSH76_21740) | - | 4777091..4777429 (-) | 339 | WP_032893298.1 | phage holin family protein | - |
| PSH76_RS21755 (PSH76_21745) | - | 4778020..4778763 (-) | 744 | WP_169855582.1 | XRE family transcriptional regulator | - |
| PSH76_RS21760 (PSH76_21750) | - | 4778988..4779476 (+) | 489 | WP_003189004.1 | Panacea domain-containing protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37580.12 Da Isoelectric Point: 5.3036
>NTDB_id=785340 PSH76_RS21655 WP_003189042.1 4763263..4764321(-) (recA) [Pseudomonas sp. FP215]
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
Nucleotide
Download Length: 1059 bp
>NTDB_id=785340 PSH76_RS21655 WP_003189042.1 4763263..4764321(-) (recA) [Pseudomonas sp. FP215]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTGATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGATCCTGAGTACGCCGGCAAACTGGG
CGTCAACGTTGATGACCTGCTGGTTTCCCAGCCGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCGGCCCTGGTGCCCAAGGCTGAAATCGAAGGCGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTTGTGGGTAGCGAA
ACCCGCGTCAAGGTTGTGAAGAACAAAGTGGCGCCGCCATTCCGTCAGGCCGAGTTCCAGATTCTCTACGGTAAGGGTAT
TTACCTGAACGGCGAGATGATCGACCTGGGCGTACTGCACGGTTTCGTCGAGAAGTCTGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGTCAGGGTAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGATATCGCTGCCACGCTTGAGAAG
CAGATCCGCGATAAGCTGCTGACCGCCGCGCCAGATGTAAAAGCGGCTGCCAACCGTGAGCCGGTTGAAGAAGTGGAAGA
AGCCGACACTGACATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTGATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGATCCTGAGTACGCCGGCAAACTGGG
CGTCAACGTTGATGACCTGCTGGTTTCCCAGCCGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCGGCCCTGGTGCCCAAGGCTGAAATCGAAGGCGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTTGTGGGTAGCGAA
ACCCGCGTCAAGGTTGTGAAGAACAAAGTGGCGCCGCCATTCCGTCAGGCCGAGTTCCAGATTCTCTACGGTAAGGGTAT
TTACCTGAACGGCGAGATGATCGACCTGGGCGTACTGCACGGTTTCGTCGAGAAGTCTGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGTCAGGGTAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGATATCGCTGCCACGCTTGAGAAG
CAGATCCGCGATAAGCTGCTGACCGCCGCGCCAGATGTAAAAGCGGCTGCCAACCGTGAGCCGGTTGAAGAAGTGGAAGA
AGCCGACACTGACATCTGA
Similar proteins
Only experimentally validated proteins are listed.