Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   PO908_RS09680 Genome accession   NZ_CP117042
Coordinates   1870572..1871717 (-) Length   381 a.a.
NCBI ID   WP_021002199.1    Uniprot ID   A0AAP6BQJ6
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1865572..1876717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS09645 (PO908_09610) - 1866036..1867277 (-) 1242 WP_021002196.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  PO908_RS09650 (PO908_09615) - 1867477..1867788 (-) 312 WP_003027765.1 DUF1292 domain-containing protein -
  PO908_RS09655 (PO908_09620) ruvX 1867805..1868224 (-) 420 WP_003026628.1 Holliday junction resolvase RuvX -
  PO908_RS09660 (PO908_09625) - 1868224..1868490 (-) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  PO908_RS09665 (PO908_09630) - 1868771..1869328 (-) 558 WP_003026633.1 SP0191 family lipoprotein -
  PO908_RS09670 (PO908_09635) - 1869432..1870001 (-) 570 WP_003026634.1 SP0191 family lipoprotein -
  PO908_RS09675 (PO908_09640) spx 1870087..1870485 (-) 399 WP_003026638.1 transcriptional regulator Spx -
  PO908_RS09680 (PO908_09645) recA 1870572..1871717 (-) 1146 WP_021002199.1 recombinase RecA Machinery gene
  PO908_RS09685 (PO908_09650) cinA 1871762..1873033 (-) 1272 WP_021002200.1 competence/damage-inducible protein A Machinery gene
  PO908_RS09690 (PO908_09655) - 1873634..1874054 (+) 421 Protein_1864 EamA family transporter -
  PO908_RS09695 (PO908_09660) - 1874157..1874735 (-) 579 WP_021002201.1 DNA-3-methyladenine glycosylase I -
  PO908_RS09700 (PO908_09665) ruvA 1874746..1875336 (-) 591 WP_021002202.1 Holliday junction branch migration protein RuvA -
  PO908_RS09705 (PO908_09670) - 1875498..1876007 (+) 510 WP_003026648.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 381 a.a.        Molecular weight: 41297.94 Da        Isoelectric Point: 4.9241

>NTDB_id=782274 PO908_RS09680 WP_021002199.1 1870572..1871717(-) (recA) [Streptococcus anginosus strain CGMH_KH1]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAIDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFDEIDHKVRVHYGLIEDDAEDEKNAEATKSTNKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1146 bp        

>NTDB_id=782274 PO908_RS09680 WP_021002199.1 1870572..1871717(-) (recA) [Streptococcus anginosus strain CGMH_KH1]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCGCTAGACACTGCACT
TAAAAATATTGAAAAAGATTTTGGTAAGGGAGCAATTATGCGCCTAGGTGAGCGTGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGTTTGGCATTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCGGTGGCGCAGGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTTGATCCAGCTTATGCGCAGGCTCTTGGGGTTAATATTGATGAACTCTTACTTTCTCAACCTGACT
CAGGCGAGCAAGGCCTTGAAATTGCTGGTAAATTGATTGACTCTGGTGCGATAGATTTGGTAGTTATTGACTCCGTGGCC
GCCCTCGTACCGCGTGCTGAAATTGACGGAGACATTGGAGATAGCCACGTTGGCTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTCTATGCGTCTGTTCGTTTGGATGTTCGCGGA
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAGATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGTGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATACTTGGCGGATCATCCAGAAATTTTTGATGAAATTGATCATAAAGTTCGAGTGCATTACGGTTTGAT
TGAGGATGATGCTGAAGATGAAAAAAATGCAGAAGCAACCAAATCAACAAACAAAGTAGAGGAAGTCACACTAGATTTGG
ATGACGCGATTGAGATTGAGGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.267

100

0.895
  recA Streptococcus pneumoniae R6

87.565

100

0.887
  recA Streptococcus pneumoniae Rx1

87.565

100

0.887
  recA Streptococcus pneumoniae D39

87.565

100

0.887
  recA Streptococcus pneumoniae TIGR4

87.565

100

0.887
  recA Streptococcus mitis SK321

88.189

100

0.882
  recA Streptococcus mutans UA159

86.423

100

0.869
  recA Streptococcus pyogenes NZ131

86.089

100

0.861
  recA Lactococcus lactis subsp. cremoris KW2

77.874

91.339

0.711
  recA Latilactobacillus sakei subsp. sakei 23K

65.746

95.013

0.625
  recA Bacillus subtilis subsp. subtilis str. 168

69.605

86.352

0.601
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Neisseria gonorrhoeae MS11

60.694

90.814

0.551
  recA Neisseria gonorrhoeae strain FA1090

60.694

90.814

0.551
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.889

85.039

0.543
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.462

85.302

0.533
  recA Vibrio cholerae strain A1552

62.462

85.302

0.533
  recA Acinetobacter baumannii D1279779

61.846

85.302

0.528
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.79

86.352

0.525
  recA Glaesserella parasuis strain SC1401

60.923

85.302

0.52
  recA Acinetobacter baylyi ADP1

60.923

85.302

0.52
  recA Helicobacter pylori 26695

58.788

86.614

0.509
  recA Helicobacter pylori strain NCTC11637

58.788

86.614

0.509
  recA Ralstonia pseudosolanacearum GMI1000

60.568

83.202

0.504
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.704

86.877

0.501
  recA Pseudomonas stutzeri DSM 10701

58.462

85.302

0.499