Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PED37_RS08145 | Genome accession | NZ_CP115665 |
| Coordinates | 1786385..1787452 (+) | Length | 355 a.a. |
| NCBI ID | WP_003252365.1 | Uniprot ID | I7B6K4 |
| Organism | Pseudomonas putida strain PD584 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1781385..1792452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PED37_RS08125 (PED37_08125) | fdxA | 1781454..1781777 (-) | 324 | WP_003252355.1 | ferredoxin FdxA | - |
| PED37_RS08130 (PED37_08130) | mutS | 1781918..1784491 (-) | 2574 | WP_010952693.1 | DNA mismatch repair protein MutS | - |
| PED37_RS08135 (PED37_08135) | - | 1784676..1785743 (+) | 1068 | WP_049588159.1 | hypothetical protein | - |
| PED37_RS08140 (PED37_08140) | - | 1785799..1786281 (+) | 483 | WP_010952695.1 | CinA family protein | - |
| PED37_RS08145 (PED37_08145) | recA | 1786385..1787452 (+) | 1068 | WP_003252365.1 | recombinase RecA | Machinery gene |
| PED37_RS08150 (PED37_08150) | recX | 1787474..1787944 (+) | 471 | WP_010952696.1 | recombination regulator RecX | - |
| PED37_RS08155 (PED37_08155) | - | 1788221..1789339 (-) | 1119 | WP_010952697.1 | LOG family protein | - |
| PED37_RS08160 (PED37_08160) | - | 1789500..1789709 (+) | 210 | WP_020193312.1 | hypothetical protein | - |
| PED37_RS08165 (PED37_08165) | - | 1789724..1790143 (-) | 420 | WP_003252372.1 | quorum-sensing-regulated virulence factor family protein | - |
| PED37_RS08170 (PED37_08170) | - | 1790360..1791070 (+) | 711 | WP_003252373.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| PED37_RS08175 (PED37_08175) | erdR | 1791250..1791900 (+) | 651 | WP_010952699.1 | response regulator transcription factor ErdR | - |
| PED37_RS08180 (PED37_08180) | - | 1791974..1792339 (+) | 366 | WP_010952700.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 37544.89 Da Isoelectric Point: 5.3228
>NTDB_id=773373 PED37_RS08145 WP_003252365.1 1786385..1787452(+) (recA) [Pseudomonas putida strain PD584]
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
Nucleotide
Download Length: 1068 bp
>NTDB_id=773373 PED37_RS08145 WP_003252365.1 1786385..1787452(+) (recA) [Pseudomonas putida strain PD584]
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGGCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAAAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGCCTGATGTCCCAGGCACTGCGTAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCCTGGTCGAAAAGTCCGGCGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCTGCTGCTGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
Similar proteins
Only experimentally validated proteins are listed.