Detailed information NTG0767078

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QN220_RS00950
• Genome accession: NZ_CP126343
• Coordinates: 194393..195376 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain DAX4
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 189393..200376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN220_RS00930 (QN220_00930)	dppA	190536..192143 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
QN220_RS00935 (QN220_00935)	-	192177..192287 (-)	111	Protein_184	hypothetical protein	-
QN220_RS00940 (QN220_00940)	dppB	192451..193470 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
QN220_RS00945 (QN220_00945)	dppC	193480..194382 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
QN220_RS00950 (QN220_00950)	amiE	194393..195376 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
QN220_RS00955 (QN220_00955)	dppF	195373..196377 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QN220_RS00960 (QN220_00960)	yhjV	196407..197678 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
QN220_RS00965 (QN220_00965)	ldrD	198154..198261 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
QN220_RS00970 (QN220_00970)	bcsG	198348..200027 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
QN220_RS00975 (QN220_00975)	bcsF	200024..200215 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=767078 QN220_RS00950 WP_001196486.1 194393..195376(+) (amiE) [Escherichia coli strain DAX4]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=767078 QN220_RS00950 WP_001196486.1 194393..195376(+) (amiE) [Escherichia coli strain DAX4]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404