Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QMY17_RS21970 Genome accession   NZ_CP125812
Coordinates   4110846..4111673 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain N3378-3At     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 4105846..4116673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS21945 abrB 4108192..4108482 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  QMY17_RS21950 rsmI 4108531..4109409 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QMY17_RS21955 yazA 4109384..4109683 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  QMY17_RS21960 trmNF 4109670..4110413 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  QMY17_RS21965 yabA 4110472..4110831 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  QMY17_RS21970 yaaT 4110846..4111673 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  QMY17_RS21975 holB 4111676..4112665 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  QMY17_RS21980 yaaR 4112677..4113117 (-) 441 WP_009966249.1 YaaR family protein -
  QMY17_RS21985 darA 4113130..4113459 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  QMY17_RS21990 tmk 4113533..4114171 (-) 639 WP_003226776.1 dTMP kinase -
  QMY17_RS21995 efpO 4114168..4115610 (-) 1443 WP_014478592.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=764222 QMY17_RS21970 WP_003226767.1 4110846..4111673(-) (yaaT) [Bacillus subtilis strain N3378-3At]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=764222 QMY17_RS21970 WP_003226767.1 4110846..4111673(-) (yaaT) [Bacillus subtilis strain N3378-3At]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996