Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   OZX61_RS06495 Genome accession   NZ_CP113932
Coordinates   1373660..1374700 (+) Length   346 a.a.
NCBI ID   WP_195770768.1    Uniprot ID   -
Organism   Acinetobacter sp. ESL0695     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1368660..1379700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OZX61_RS06480 (OZX61_06480) rpsT 1371757..1372026 (+) 270 WP_195770766.1 30S ribosomal protein S20 -
  OZX61_RS06485 (OZX61_06485) - 1372072..1372926 (-) 855 WP_277094248.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  OZX61_RS06490 (OZX61_06490) - 1373113..1373520 (+) 408 WP_195770873.1 S4 domain-containing protein -
  OZX61_RS06495 (OZX61_06495) recA 1373660..1374700 (+) 1041 WP_195770768.1 recombinase RecA Machinery gene
  OZX61_RS06500 (OZX61_06500) - 1374760..1375245 (+) 486 WP_277094249.1 regulatory protein RecX -
  OZX61_RS06510 (OZX61_06510) - 1375571..1376419 (+) 849 WP_277094250.1 YbgF trimerization domain-containing protein -
  OZX61_RS06515 (OZX61_06515) lpxA 1376477..1377265 (-) 789 WP_277094251.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  OZX61_RS06520 (OZX61_06520) fabZ 1377273..1377752 (-) 480 WP_195770772.1 3-hydroxyacyl-ACP dehydratase FabZ -
  OZX61_RS06525 (OZX61_06525) lpxD 1377754..1378827 (-) 1074 WP_277094252.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  OZX61_RS06530 (OZX61_06530) - 1378831..1379319 (-) 489 WP_277094253.1 OmpH family outer membrane protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37456.89 Da        Isoelectric Point: 5.2972

>NTDB_id=763619 OZX61_RS06495 WP_195770768.1 1373660..1374700(+) (recA) [Acinetobacter sp. ESL0695]
MDENKSKALNVALGQIEKQFGKNTVMRLGDNTVQAVEAISTGSLQLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAVDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRAGQVKEGDEIIGSE
TKIKVVKNKMAPPFREALFQILYGKGVNHLGEVIDLAVQQDIIQKAGAWYSYQGSKIGQGKNNVIRYLEENQAIVEEVEK
LIRSQLLTTAQPVEEKSSSADNDVDL

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=763619 OZX61_RS06495 WP_195770768.1 1373660..1374700(+) (recA) [Acinetobacter sp. ESL0695]
ATGGATGAGAATAAAAGTAAGGCACTGAACGTTGCTTTAGGCCAAATTGAAAAACAATTTGGTAAAAATACAGTAATGCG
TTTAGGTGATAATACTGTACAAGCTGTTGAAGCAATCTCGACAGGCTCATTGCAACTGGATATTGCGCTTGGTATTGGAG
GTTTACCTAAAGGACGTATTGTTGAAATTTATGGTCCTGAATCATCTGGTAAAACTACGATGACACTTCAGGCGATTGCA
GAATGTCAGAAAGCTGGCGGCACATGTGCATTTATCGATGCTGAACATGCACTTGATCCACAGTATGCACGTAAACTTGG
TGTAGATATTGATAACCTACTCGTATCTCAACCCGATCATGGTGAGCAAGCATTAGAGATTGCAGATATGCTCGTGCGCT
CAGGCGCTGTAGATTTGATCGTTGTCGACTCTGTTGCCGCTTTAACACCAAGAGCAGAAATTGAAGGCGAAATGGGTGAC
TCTCATATGGGTCTACAAGCACGACTCATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCGAATTGTAT
GGTTATTTTCATTAACCAAATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCTGAAACCACTACAGGTGGTAACGCAC
TGAAATTCTATGCTTCTGTTCGATTAGATATTCGTCGCGCAGGTCAAGTTAAAGAAGGTGATGAAATCATTGGTTCTGAG
ACAAAAATTAAGGTTGTCAAAAACAAAATGGCTCCTCCATTTAGAGAAGCATTATTTCAAATCCTTTATGGTAAAGGGGT
TAATCATTTAGGTGAAGTGATTGACCTAGCAGTACAGCAAGATATTATTCAAAAAGCTGGTGCATGGTATTCATATCAAG
GTAGTAAAATTGGCCAAGGTAAGAATAATGTCATACGCTACTTAGAGGAAAATCAAGCAATTGTAGAGGAAGTTGAAAAA
CTAATCCGTTCTCAACTACTTACAACAGCACAGCCTGTAGAAGAAAAATCATCTTCAGCTGATAATGATGTAGACCTCTA
A

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

88.15

100

0.882
  recA Acinetobacter baumannii D1279779

90.881

95.087

0.864
  recA Pseudomonas stutzeri DSM 10701

74.566

100

0.746
  recA Vibrio cholerae strain A1552

71.802

99.422

0.714
  recA Vibrio cholerae O1 biovar El Tor strain E7946

71.802

99.422

0.714
  recA Glaesserella parasuis strain SC1401

68.622

98.555

0.676
  recA Ralstonia pseudosolanacearum GMI1000

69.419

94.509

0.656
  recA Neisseria gonorrhoeae MS11

67.692

93.931

0.636
  recA Neisseria gonorrhoeae MS11

67.692

93.931

0.636
  recA Neisseria gonorrhoeae strain FA1090

67.692

93.931

0.636
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.746

95.665

0.61
  recA Streptococcus mutans UA159

60.458

100

0.61
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.22

94.509

0.607
  recA Helicobacter pylori strain NCTC11637

63.914

94.509

0.604
  recA Helicobacter pylori 26695

63.609

94.509

0.601
  recA Streptococcus pneumoniae R6

60.465

99.422

0.601
  recA Streptococcus pneumoniae TIGR4

60.465

99.422

0.601
  recA Streptococcus pneumoniae Rx1

60.465

99.422

0.601
  recA Streptococcus pneumoniae D39

60.465

99.422

0.601
  recA Bacillus subtilis subsp. subtilis str. 168

62.733

93.064

0.584
  recA Streptococcus mitis NCTC 12261

61.963

94.22

0.584
  recA Streptococcus mitis SK321

61.656

94.22

0.581
  recA Streptococcus pyogenes NZ131

60.976

94.798

0.578
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.736

94.22

0.572
  recA Latilactobacillus sakei subsp. sakei 23K

56.977

99.422

0.566
  recA Lactococcus lactis subsp. cremoris KW2

59.568

93.642

0.558