Detailed information NTG0075079

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CLAM6_RS15620
• Genome accession: NZ_AP021868
• Coordinates: 3742797..3743864 (-)
• Length: 355 a.a.
• NCBI ID: WP_043332943.1
• Uniprot ID: A0A0P7E2A3
• Organism: Cobetia sp. AM6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3737797..3748864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLAM6_RS15610 (CLAM6_30950)	alaS	3739134..3741737 (-)	2604	WP_153636586.1	alanine--tRNA ligase	-
CLAM6_RS15615 (CLAM6_30960)	-	3741980..3742564 (-)	585	WP_153636995.1	regulatory protein RecX	-
CLAM6_RS15620 (CLAM6_30970)	recA	3742797..3743864 (-)	1068	WP_043332943.1	recombinase RecA	Machinery gene
CLAM6_RS15625 (CLAM6_30980)	-	3744080..3744568 (-)	489	WP_225348181.1	CinA family protein	-
CLAM6_RS15630 (CLAM6_30990)	mutS	3744783..3747362 (+)	2580	WP_153636588.1	DNA mismatch repair protein MutS	-
CLAM6_RS15635 (CLAM6_31000)	fdxA	3747642..3747965 (+)	324	WP_043333067.1	ferredoxin FdxA	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37925.18 Da
• Isoelectric Point: 4.8504

>NTDB_id=75079 CLAM6_RS15620 WP_043332943.1 3742797..3743864(-) (recA) [Cobetia sp. AM6]
MAKDDNRTKALNAALSQIERQFGKGAVMRMGDAPRVAIPSVSTGSLGLDIALGIGGLPFGRVVEIYGPESSGKTTLTLSV
IAQAQKQGKVCAFIDAEHALDPSYAEKLGVNLDEMLVSQPDTGEQALEIVDMLVRSGGVDVIIVDSVAALTPRAEIEGEM
GDSHVGLQARLMSQALRKVTGHIKNANCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSVKSGDEVTG
NETRVKVVKNKVAPPFRQAEFQILYGKGIYHAGEVIDLGVQCGLVGKSGAWYSYQGSKIGQGKANSAQYLEDNPAIMEEI
ETQIRAQLLAAPEAKEEPKETAAAESEDDLDIDLD

Nucleotide

• Length: 1068 bp

>NTDB_id=75079 CLAM6_RS15620 WP_043332943.1 3742797..3743864(-) (recA) [Cobetia sp. AM6]
ATGGCAAAGGACGACAATCGTACCAAGGCGCTGAACGCGGCGCTGTCCCAGATCGAGCGCCAGTTCGGCAAGGGCGCCGT
CATGCGCATGGGCGATGCCCCGCGTGTGGCCATCCCGTCGGTTTCCACCGGTTCTCTGGGGCTGGATATCGCACTCGGCA
TCGGCGGCCTGCCCTTCGGGCGCGTGGTCGAGATCTATGGCCCGGAATCCTCGGGCAAGACGACACTGACCCTCTCGGTC
ATCGCCCAGGCGCAGAAGCAGGGCAAGGTCTGTGCCTTCATCGATGCCGAGCACGCACTGGATCCGTCCTACGCCGAGAA
GCTGGGCGTCAATCTGGACGAGATGCTGGTCTCCCAGCCGGACACCGGTGAGCAGGCGCTCGAGATCGTCGACATGCTGG
TACGCTCCGGCGGCGTTGACGTCATCATCGTCGACTCCGTGGCGGCACTGACGCCGCGTGCCGAGATCGAAGGCGAGATG
GGCGACTCCCACGTCGGCCTGCAGGCGCGTCTGATGTCCCAGGCGCTGCGCAAGGTGACCGGTCACATCAAGAACGCCAA
CTGCATGGTGGTGTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAGCCCCGAAACCACGACTGGCGGTA
ACGCACTGAAGTTCTACTCCAGTGTGCGTCTGGATATCCGTCGCACCGGTTCCGTGAAGTCCGGTGATGAAGTCACCGGT
AACGAGACCCGCGTCAAGGTCGTCAAGAACAAGGTCGCGCCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTCTACGGCAA
GGGCATCTATCACGCCGGTGAGGTGATCGATCTGGGCGTGCAGTGTGGTCTGGTCGGCAAGTCAGGCGCCTGGTACAGCT
ATCAGGGCAGCAAGATCGGTCAGGGCAAGGCCAATTCCGCCCAGTACCTGGAAGACAATCCCGCCATCATGGAGGAGATT
GAAACCCAGATCCGTGCCCAGTTGCTGGCAGCGCCGGAAGCCAAGGAAGAGCCGAAAGAGACCGCGGCCGCCGAGAGTGA
AGACGACCTGGATATCGATCTCGACTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

3D structure

• AlphaFold DB: A0A0P7E2A3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	79.943	98.31	0.786
recA	Acinetobacter baylyi ADP1	73.469	96.62	0.71
recA	Acinetobacter baumannii D1279779	72.222	96.338	0.696
recA	Vibrio cholerae strain A1552	68.481	98.31	0.673
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.481	98.31	0.673
recA	Glaesserella parasuis strain SC1401	67.908	98.31	0.668
recA	Neisseria gonorrhoeae MS11	72.446	90.986	0.659
recA	Neisseria gonorrhoeae MS11	72.446	90.986	0.659
recA	Neisseria gonorrhoeae strain FA1090	72.446	90.986	0.659
recA	Ralstonia pseudosolanacearum GMI1000	71.111	88.732	0.631
recA	Helicobacter pylori 26695	60.704	96.056	0.583
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.497	91.831	0.583
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.562	93.803	0.577
recA	Helicobacter pylori strain NCTC11637	60.117	96.056	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	63.438	90.141	0.572
recA	Streptococcus pyogenes NZ131	56.901	100	0.569
recA	Latilactobacillus sakei subsp. sakei 23K	57.102	99.155	0.566
recA	Streptococcus mitis NCTC 12261	56.338	100	0.563
recA	Streptococcus pneumoniae D39	55.278	100	0.561
recA	Streptococcus pneumoniae TIGR4	55.278	100	0.561
recA	Streptococcus pneumoniae Rx1	55.278	100	0.561
recA	Streptococcus pneumoniae R6	55.278	100	0.561
recA	Streptococcus mitis SK321	56.056	100	0.561
recA	Streptococcus mutans UA159	56.056	100	0.561
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.447	92.676	0.532
recA	Lactococcus lactis subsp. cremoris KW2	57.099	91.268	0.521