Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | N5980_RS08975 | Genome accession | NZ_CP104651 |
| Coordinates | 1818580..1819623 (+) | Length | 347 a.a. |
| NCBI ID | WP_261634868.1 | Uniprot ID | - |
| Organism | Acinetobacter variabilis strain 2021CK-01005 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1813580..1824623
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5980_RS08935 (N5980_08930) | rraA | 1813587..1814096 (-) | 510 | WP_261634865.1 | ribonuclease E activity regulator RraA | - |
| N5980_RS08940 (N5980_08935) | - | 1814109..1814774 (-) | 666 | WP_004786137.1 | NAD-dependent epimerase/dehydratase family protein | - |
| N5980_RS08945 (N5980_08940) | rpsT | 1814988..1815257 (+) | 270 | WP_004786139.1 | 30S ribosomal protein S20 | - |
| N5980_RS08950 (N5980_08945) | - | 1815397..1815519 (-) | 123 | WP_004786141.1 | hypothetical protein | - |
| N5980_RS08955 (N5980_08950) | - | 1815641..1816390 (-) | 750 | WP_261634866.1 | histidine phosphatase family protein | - |
| N5980_RS08960 (N5980_08955) | - | 1816451..1817302 (-) | 852 | WP_261634867.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ family protein | - |
| N5980_RS08965 (N5980_08960) | - | 1817315..1818001 (+) | 687 | WP_214001312.1 | HAD-IA family hydrolase | - |
| N5980_RS08970 (N5980_08965) | - | 1817994..1818434 (+) | 441 | WP_004786147.1 | RNA-binding S4 domain-containing protein | - |
| N5980_RS08975 (N5980_08970) | recA | 1818580..1819623 (+) | 1044 | WP_261634868.1 | recombinase RecA | Machinery gene |
| N5980_RS08980 (N5980_08975) | - | 1819699..1820313 (+) | 615 | WP_261634869.1 | regulatory protein RecX | - |
| N5980_RS08990 (N5980_08985) | - | 1821008..1821811 (+) | 804 | WP_261634870.1 | YbgF trimerization domain-containing protein | - |
| N5980_RS08995 (N5980_08990) | lpxA | 1821882..1822670 (-) | 789 | WP_005235299.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| N5980_RS09000 (N5980_08995) | fabZ | 1822667..1823152 (-) | 486 | WP_171064833.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| N5980_RS09005 (N5980_09000) | lpxD | 1823158..1824228 (-) | 1071 | WP_261634871.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37776.25 Da Isoelectric Point: 5.0543
>NTDB_id=731253 N5980_RS08975 WP_261634868.1 1818580..1819623(+) (recA) [Acinetobacter variabilis strain 2021CK-01005]
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTGKVVENKDEEEPADFLDA
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTGKVVENKDEEEPADFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=731253 N5980_RS08975 WP_261634868.1 1818580..1819623(+) (recA) [Acinetobacter variabilis strain 2021CK-01005]
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACGGGTTCTTTAACGCTTGATATTGCACTCGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAGACCACAATGACATTACAAGCAATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCACTTGATCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAGCCAGACAATGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTACGCT
CTGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGCGCCGAAATTGAAGGCGAAATGGGTGAC
TCACATATGGGTCTACAAGCACGTTTGATGAGCCAAGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATTTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCGGAAACGACTACTGGTGGTAATGCAC
TGAAATTCTATGCTTCTGTACGTCTGGATATCCGCCGTATCGGTCAGGTGAAAGAAGGCGACGAGATCGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAACAAAATGGCGCCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATCGTTCAAAAAGCGGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAGAACAATACTATCCGTTATCTGGAAGAACACAAAGAGCTGGCGGATACCATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAGGCAAAGTAGTCGAAAATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAG
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACGGGTTCTTTAACGCTTGATATTGCACTCGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAGACCACAATGACATTACAAGCAATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCACTTGATCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAGCCAGACAATGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTACGCT
CTGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGCGCCGAAATTGAAGGCGAAATGGGTGAC
TCACATATGGGTCTACAAGCACGTTTGATGAGCCAAGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATTTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCGGAAACGACTACTGGTGGTAATGCAC
TGAAATTCTATGCTTCTGTACGTCTGGATATCCGCCGTATCGGTCAGGTGAAAGAAGGCGACGAGATCGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAACAAAATGGCGCCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATCGTTCAAAAAGCGGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAGAACAATACTATCCGTTATCTGGAAGAACACAAAGAGCTGGCGGATACCATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAGGCAAAGTAGTCGAAAATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.