Detailed information NTG0725338

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NYR67_RS05670
• Genome accession: NZ_CP103813
• Coordinates: 1275037..1276167 (-)
• Length: 376 a.a.
• NCBI ID: WP_039197470.1
• Uniprot ID: -
• Organism: Actinobacillus equuli subsp. equuli strain 4130
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1261457..1274985	1275037..1276167	flank	52

Gene organization within MGE regions

Location: 1261457..1276167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR67_RS05580 (NYR67_05580)	-	1261457..1261978 (-)	522	WP_279442859.1	hypothetical protein	-
NYR67_RS05585 (NYR67_05585)	-	1261960..1262646 (-)	687	WP_279442860.1	pilus assembly protein PilM	-
NYR67_RS05590 (NYR67_05590)	-	1262785..1265370 (+)	2586	WP_279470511.1	penicillin-binding protein 1A	-
NYR67_RS05595 (NYR67_05595)	aroK	1265634..1266155 (+)	522	WP_005623982.1	shikimate kinase AroK	-
NYR67_RS05600 (NYR67_05600)	aroB	1266172..1267260 (+)	1089	WP_039197450.1	3-dehydroquinate synthase	-
NYR67_RS05605 (NYR67_05605)	-	1267264..1268100 (+)	837	WP_039197452.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
NYR67_RS05610 (NYR67_05610)	-	1268170..1269528 (+)	1359	WP_279470512.1	sodium-dependent transporter	-
NYR67_RS05615 (NYR67_05615)	pgi	1269656..1271296 (-)	1641	WP_279436627.1	glucose-6-phosphate isomerase	-
NYR67_RS05620 (NYR67_05620)	-	1271335..1271586 (-)	252	WP_039197458.1	accessory factor UbiK family protein	-
NYR67_RS05645 (NYR67_05645)	aroE	1272309..1273133 (-)	825	WP_279436628.1	shikimate dehydrogenase	-
NYR67_RS05650 (NYR67_05650)	-	1273140..1273694 (-)	555	WP_279470513.1	Sua5/YciO/YrdC/YwlC family protein	-
NYR67_RS05655 (NYR67_05655)	-	1273687..1274220 (-)	534	WP_039197464.1	type I DNA topoisomerase	-
NYR67_RS05660 (NYR67_05660)	yqfB	1274220..1274525 (-)	306	WP_275217138.1	N(4)-acetylcytidine aminohydrolase	-
NYR67_RS05665 (NYR67_05665)	recX	1274518..1274973 (-)	456	WP_237610172.1	recombination regulator RecX	-
NYR67_RS05670 (NYR67_05670)	recA	1275037..1276167 (-)	1131	WP_039197470.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 40560.21 Da
• Isoelectric Point: 4.5881

>NTDB_id=725338 NYR67_RS05670 WP_039197470.1 1275037..1276167(-) (recA) [Actinobacillus equuli subsp. equuli strain 4130]
MAADNKKAQKNTVTKQIDPEQKEKALAAALAQIEKQFGKGSIMRLGDTQALDIEAVSTGSIGLDAALGIGGLPMGRIVEI
YGPESSGKTTLTLSVIAQAQKSGKTCAFIDAEHALDPVYARKLGVDTDALLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRSGVVKDGDEVVGSETKVKIVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIQKAGAWFSYEGTKIGQGKNN
AIKWLKENAEIANKIEQEIRELLISTPEKTSAGEQNVLDADDVNDFEDEEFNEEEL

Nucleotide

• Length: 1131 bp

>NTDB_id=725338 NYR67_RS05670 WP_039197470.1 1275037..1276167(-) (recA) [Actinobacillus equuli subsp. equuli strain 4130]
ATGGCAGCTGACAACAAAAAAGCGCAAAAGAATACAGTAACAAAACAAATCGATCCGGAACAAAAAGAAAAAGCATTAGC
AGCTGCTCTTGCCCAAATTGAAAAACAATTTGGTAAAGGATCTATCATGCGCTTAGGTGATACACAAGCGCTTGATATTG
AAGCGGTTTCAACCGGTTCAATCGGTTTAGATGCCGCATTAGGTATCGGCGGTTTACCGATGGGACGTATCGTTGAGATC
TATGGCCCGGAATCTTCAGGTAAAACAACACTGACTTTATCGGTCATTGCGCAAGCACAAAAATCAGGTAAAACTTGTGC
ATTTATTGATGCGGAACACGCACTTGATCCGGTTTATGCACGCAAATTAGGCGTGGATACCGATGCGTTGTTAATTTCTC
AACCGGATAACGGTGAGCAAGCACTTGAGATTTGTGATGCGTTAGTTCGCTCCGGTGCGGTTGATGTGATTATTGTGGAC
TCGGTTGCTGCATTAACGCCGAAAGCGGAAATTGAAGGTGATATGGGCGATTCTCACATGGGCTTACAAGCACGTTTAAT
GTCACAAGCATTACGTAAGTTAACCGCAAATATTAAGGCGACTAACTGCTTAGTGGTGTTTATCAACCAAATTCGTATGA
AGATCGGTGTGATGTTCGGTAACCCGGAAACAACAACCGGCGGTAATGCACTTAAATTCTACGCTTCGGTTCGTTTAGAT
ATCCGCCGTTCAGGTGTAGTAAAAGACGGTGATGAAGTGGTTGGTAGCGAAACGAAAGTAAAAATTGTGAAAAATAAAGT
TGCGCCGCCGTTCCGTGAAGTTCAATTTGACATTATGTATGGCGAAGGGATTTCACGTATGAATGAACTATTGATCCTTG
CTGAAGCGAATGGCTTTATTCAAAAAGCGGGTGCTTGGTTCTCATACGAAGGTACGAAAATCGGCCAAGGTAAAAATAAT
GCAATTAAATGGTTAAAAGAGAACGCAGAGATTGCAAACAAAATTGAACAAGAAATTCGTGAGTTACTCATTTCAACACC
GGAAAAAACATCAGCAGGCGAGCAGAATGTATTAGATGCCGATGATGTGAATGACTTTGAAGACGAAGAGTTTAACGAAG
AAGAACTATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (24-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	84.085	100	0.843
recA	Pseudomonas stutzeri DSM 10701	71.802	91.489	0.657
recA	Vibrio cholerae strain A1552	71.221	91.489	0.652
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.221	91.489	0.652
recA	Acinetobacter baylyi ADP1	72.404	89.628	0.649
recA	Acinetobacter baumannii D1279779	74.618	86.968	0.649
recA	Neisseria gonorrhoeae MS11	70.988	86.17	0.612
recA	Neisseria gonorrhoeae MS11	70.988	86.17	0.612
recA	Neisseria gonorrhoeae strain FA1090	70.988	86.17	0.612
recA	Ralstonia pseudosolanacearum GMI1000	71.746	83.777	0.601
recA	Streptococcus mutans UA159	56.736	100	0.582
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.848	87.766	0.569
recA	Streptococcus mitis SK321	58.038	97.606	0.566
recA	Streptococcus mitis NCTC 12261	60.882	90.426	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.677	88.83	0.548
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.975	85.638	0.548
recA	Bacillus subtilis subsp. subtilis str. 168	63.75	85.106	0.543
recA	Streptococcus pneumoniae TIGR4	62.346	86.17	0.537
recA	Streptococcus pneumoniae D39	62.346	86.17	0.537
recA	Streptococcus pneumoniae R6	62.346	86.17	0.537
recA	Streptococcus pneumoniae Rx1	62.346	86.17	0.537
recA	Helicobacter pylori strain NCTC11637	61.212	87.766	0.537
recA	Streptococcus pyogenes NZ131	59.118	90.426	0.535
recA	Helicobacter pylori 26695	60.909	87.766	0.535
recA	Lactococcus lactis subsp. cremoris KW2	57.018	90.957	0.519
recA	Latilactobacillus sakei subsp. sakei 23K	57.944	85.372	0.495